Annotations: 9L5V

cryo-EM structure of PSII-ACPII from Rhodomonas sp. NIES-2332

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Y [auth k]	tRNA-synt_1g	e9l5vk1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
I [auth K]	MbtH	e9l5vK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
X [auth i]	MbtH	e9l5vi1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
H [auth I]	tRNA-synt_1g	e9l5vI1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
W [auth h]	tRNA-synt_1g	e9l5vh1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
G [auth H]	MbtH	e9l5vH1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
F	tRNA-synt_1g	e9l5vF1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
V [auth f]	MbtH	e9l5vf1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
U [auth e]	MbtH	e9l5ve1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
E	tRNA-synt_1g	e9l5vE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
D	PAD_N	e9l5vD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PAD_N	ECOD (v295.2)
T [auth d]	PAD_N	e9l5vd1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PAD_N	ECOD (v295.2)
S [auth c]	tRNA-synt_1g	e9l5vc1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
C	MbtH	e9l5vC1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
MA [auth 6]		e9l5v61	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F:	ECOD (v295.2)
SA [auth S]		e9l5vS1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F:	ECOD (v295.2)
KA [auth 4]	MbtH	e9l5v41	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
QA [auth Q]	tRNA-synt_1g	e9l5vQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
R [auth b]	CLP_protease	e9l5vb1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CLP_protease	ECOD (v295.2)
B	CLP_protease	e9l5vB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CLP_protease	ECOD (v295.2)
PA [auth P]	tRNA-synt_1g	e9l5vP1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
JA [auth 3]	MbtH	e9l5v31	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
IA [auth 2]	tRNA-synt_1g	e9l5v21	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
OA [auth O]	MbtH	e9l5vO1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
GA [auth 1]	MbtH	e9l5v11	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
HA [auth N]	MbtH	e9l5vN1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
FA [auth z]	MbtH	e9l5vz1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
P [auth Z]	tRNA-synt_1g	e9l5vZ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
EA [auth y]	MbtH	e9l5vy1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
O [auth Y]	tRNA-synt_1g	e9l5vY1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
N [auth X]	tRNA-synt_1g	e9l5vX1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
DA [auth x]	MbtH	e9l5vx1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
L [auth T]	PAD_N	e9l5vT1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PAD_N	ECOD (v295.2)
BA [auth t]	PAD_N	e9l5vt1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: PAD_N	ECOD (v295.2)
AA [auth m]	MbtH	e9l5vm1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)
K [auth M]	tRNA-synt_1g	e9l5vM1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
Z [auth l]	CLP_protease	e9l5vl1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CLP_protease	ECOD (v295.2)
J [auth L]	CLP_protease	e9l5vL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: CLP_protease	ECOD (v295.2)
Q [auth a]	tRNA-synt_1g	e9l5va1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: tRNA-synt_1g	ECOD (v295.2)
A	MbtH	e9l5vA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MbtH	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth K], Y [auth k]	Photosystem II reaction center protein K	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
H [auth I], X [auth i]	Photosystem II reaction center protein I	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
G [auth H], W [auth h]	Photosystem II reaction center protein H	ion binding binding anion binding phosphate ion binding small molecule binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
F, V [auth f]	Cytochrome b559 subunit beta	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
E, U [auth e]	Cytochrome b559 subunit alpha	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
D, T [auth d]	Photosystem II D2 protein	chlorophyll binding binding tetrapyrrole binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
C, S [auth c]	Photosystem II CP43 reaction center protein	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
TA [auth g]	Psb-gama_linker	-	-	-
NA [auth G]	Psb-gama_linker	-	-	-
MA [auth 6], SA [auth S]	ACPII-6	-	-	-
LA [auth 5], RA [auth R]	ACPII-5	-	-	-
KA [auth 4], QA [auth Q]	ACPII-4	-	-	-
B, R [auth b]	Photosystem II CP47 reaction center protein	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
JA [auth 3], PA [auth P]	ACPII-3	-	-	-
IA [auth 2], OA [auth O]	ACPII-2	-	-	-
GA [auth 1], HA [auth N]	ACPII-1	-	-	-
FA [auth z], P [auth Z]	Photosystem II reaction center protein Z	-	photosynthesis metabolic process cellular process regulation of biological process regulation of cellular process regulation of photosynthesis photosynthesis, light reaction photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of metabolic process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
EA [auth y], O [auth Y]	Photosystem II reaction center protein Psb30	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
DA [auth x], N [auth X]	Photosystem II reaction center X protein	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
CA [auth w], M [auth W]	Photosystem II protein W	-	-	-
BA [auth t], L [auth T]	Photosystem II reaction center protein T	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
AA [auth m], K [auth M]	Photosystem II protein M	-	-	-
J [auth L], Z [auth l]	Photosystem II reaction center protein L	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
A, Q [auth a]	Photosystem II protein D1	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity oxidoreductase activity, acting on diphenols and related substances as donors catalytic activity chlorophyll binding binding tetrapyrrole binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth K], Y [auth k]	IPR037270	Photosystem II PsbK superfamily	Homologous Superfamily
I [auth K], Y [auth k]	IPR003687	Photosystem II PsbK	Family
H [auth I], X [auth i]	IPR037271	Photosystem II PsbI superfamily	Homologous Superfamily
H [auth I], X [auth i]	IPR003686	Photosystem II PsbI	Family
G [auth H], W [auth h]	IPR036863	Photosystem II reaction centre protein H superfamily	Homologous Superfamily
G [auth H], W [auth h]	IPR001056	Photosystem II reaction centre protein H	Family
F, V [auth f]	IPR006241	Photosystem II cytochrome b559, beta subunit	Family
F, V [auth f]	IPR013081	Photosystem II cytochrome b559, N-terminal	Domain
F, V [auth f]	IPR006216	Photosystem II cytochrome b559, conserved site	Conserved Site
E, U [auth e]	IPR013081	Photosystem II cytochrome b559, N-terminal	Domain
E, U [auth e]	IPR006217	Photosystem II cytochrome b559, alpha subunit	Family
E, U [auth e]	IPR013082	Photosystem II cytochrome b559, alpha subunit, lumenal region	Domain
E, U [auth e]	IPR037025	Photosystem II cytochrome b559, alpha subunit superfamily	Homologous Superfamily
E, U [auth e]	IPR006216	Photosystem II cytochrome b559, conserved site	Conserved Site
D, T [auth d]	IPR005868	Photosystem II D2	Family
D, T [auth d]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
D, T [auth d]	IPR000484	Photosynthetic reaction centre, L/M	Family
D, T [auth d]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
D, T [auth d]	IPR055266	Photosystem II protein D1/D2	Family
C, S [auth c]	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
C, S [auth c]	IPR000932	Photosystem antenna protein-like	Family
C, S [auth c]	IPR005869	Photosystem II CP43 reaction centre protein	Family
C, S [auth c]	IPR044900	Photosystem II CP43 reaction centre protein superfamily	Homologous Superfamily
MA [auth 6], SA [auth S]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
MA [auth 6], SA [auth S]	IPR022796	Chlorophyll A-B binding protein	Family
LA [auth 5], RA [auth R]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
LA [auth 5], RA [auth R]	IPR022796	Chlorophyll A-B binding protein	Family
KA [auth 4], QA [auth Q]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
KA [auth 4], QA [auth Q]	IPR022796	Chlorophyll A-B binding protein	Family
B, R [auth b]	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
B, R [auth b]	IPR000932	Photosystem antenna protein-like	Family
B, R [auth b]	IPR017486	Photosystem II CP47 reaction centre protein	Family
JA [auth 3], PA [auth P]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
JA [auth 3], PA [auth P]	IPR022796	Chlorophyll A-B binding protein	Family
IA [auth 2], OA [auth O]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
IA [auth 2], OA [auth O]	IPR022796	Chlorophyll A-B binding protein	Family
GA [auth 1], HA [auth N]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
GA [auth 1], HA [auth N]	IPR022796	Chlorophyll A-B binding protein	Family
FA [auth z], P [auth Z]	IPR036512	Photosystem II PsbZ superfamily	Homologous Superfamily
FA [auth z], P [auth Z]	IPR002644	Photosystem II PsbZ, reaction centre	Family
EA [auth y], O [auth Y]	IPR010284	Photosystem II reaction center protein Ycf12	Family
DA [auth x], N [auth X]	IPR009518	Photosystem II PsbX	Family
DA [auth x], N [auth X]	IPR023431	Photosystem II PsbX, type 1 subfamily	Family
BA [auth t], L [auth T]	IPR001743	Photosystem II PsbT	Family
BA [auth t], L [auth T]	IPR037268	Photosystem II PsbT superfamily	Homologous Superfamily
AA [auth m], K [auth M]	IPR007826	Photosystem II PsbM	Family
AA [auth m], K [auth M]	IPR037269	Photosystem II PsbM superfamily	Homologous Superfamily
J [auth L], Z [auth l]	IPR003372	Photosystem II PsbL	Family
J [auth L], Z [auth l]	IPR037266	Photosystem II PsbL superfamily	Homologous Superfamily
A, Q [auth a]	IPR005867	Photosystem II protein D1	Family
A, Q [auth a]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
A, Q [auth a]	IPR000484	Photosynthetic reaction centre, L/M	Family
A, Q [auth a]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
A, Q [auth a]	IPR055266	Photosystem II protein D1/D2	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9L5V | pdb_00009l5v

cryo-EM structure of PSII-ACPII from Rhodomonas sp. NIES-2332

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage