Cryo-EM structure of bacteriophage T1 capsid
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | Beta-Casp | e9kzjG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| F | Beta-Casp | e9kzjF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| E | Beta-Casp | e9kzjE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| D | Beta-Casp | e9kzjD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| C | Beta-Casp | e9kzjC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| B | Beta-Casp | e9kzjB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| A | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kzjA01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth H] | PF22758 | Structural cement protein (E217 gp24/Pam3 gp6) (Phage_cement) | Structural cement protein (E217 gp24/Pam3 gp6) | - | Family |
| PF22758 | Structural cement protein (E217 gp24/Pam3 gp6) (Phage_cement) | Structural cement protein (E217 gp24/Pam3 gp6) | - | Family | |
| PF09950 | Major capsid protein (Major_capside) | Major capsid protein | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| I [auth H] | IPR054438 | Structural cement protein E217 gp24/Pam3 gp6 | Family |
| I [auth H] | IPR003343 | Bacterial Ig-like domain, group 2 | Domain |
| I [auth H] | IPR008964 | Invasin/intimin cell-adhesion fragments | Homologous Superfamily |
| IPR054438 | Structural cement protein E217 gp24/Pam3 gp6 | Family | |
| IPR020049 | Major capsid protein-like | Family |














