PSI-LHCI supercomplex binding with 10 Lhcas from C. subellipsoidea
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpB01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| C | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpC01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| D | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpD01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| E | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpE01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| F | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpF01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| G | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpG01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| H | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpH01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| I | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpI01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| J | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpJ01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| K | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpK01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| L [auth M] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpM01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| N [auth 3] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp301 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| O [auth 7] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp701 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| P [auth 8] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp801 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| Q [auth 9] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp901 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| R [auth L] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpL01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| U [auth 2] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp201 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| V [auth 4] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp401 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| W [auth 5] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp501 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| X [auth 6] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqp601 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
| T [auth b] | Beta-Casp | e9kqpb1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: Beta-Casp | ECOD (v295) |
| M [auth a] | U6-snRNA_bdg,U5_2-snRNA_bdg | e9kqpa01 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: U6-snRNA_bdg,U5_2-snRNA_bdg | ECOD (v295) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family | |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family | |
| PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family | |
| PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family | |
| PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain | |
| PF02531 | PsaD (PsaD) | PsaD | - | Family | |
| PF02427 | Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE) | Photosystem I reaction centre subunit IV / PsaE | PsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. | Domain | |
| PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family | |
| PF00796 | Photosystem I reaction centre subunit VIII (PSI_8) | Photosystem I reaction centre subunit VIII | - | Family | |
| PF01701 | Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) | Photosystem I reaction centre subunit IX / PsaJ | - | Family | |
| PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family | |
| L [auth M] | PF07465 | Photosystem I protein M (PsaM) (PsaM) | Photosystem I protein M (PsaM) | - | Family |
| O [auth 7] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| P [auth 8] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| Q [auth 9] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| R [auth L] | PF02605 | Photosystem I reaction centre subunit XI (PsaL) | Photosystem I reaction centre subunit XI | - | Family |
| U [auth 2] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| V [auth 4] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| W [auth 5] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| X [auth 6] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |














