9KOH | pdb_00009koh

Structure of human PRC2-SAH-H3K27me3-C36

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth K]	SCOP2B Superfamily	WD40 repeat-like	8053350	3001694	SCOP2B (2022-06-29)
E [auth O]	SCOP2B Superfamily	VEFS box-like	8090819	3002459	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth D]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
G [auth K]	PF12265	Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd)	Histone-binding protein RBBP4 or subunit C of CAF1 complex	-	Repeat
G [auth K]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat
F	PF26014	AEBP2-like, C-terminal SH3 domain (SH3_AEBP2_C)	AEBP2-like, C-terminal SH3 domain	This domain is found at the C-terminal end of human Zinc finger protein AEBP2 and similar sequences mainly found in animals. AEBP2 acts as an accessory subunit for the core Polycomb repressive complex 2, which mediates histone H3K27 trimethylation on ...	This domain is found at the C-terminal end of human Zinc finger protein AEBP2 and similar sequences mainly found in animals. AEBP2 acts as an accessory subunit for the core Polycomb repressive complex 2, which mediates histone H3K27 trimethylation on chromatin leading to transcriptional repression of the affected target gene [1-3]. This domain shows a mainly beta configuration.	Domain
E [auth O]	PF23320	Polycomb protein SUZ12-like, Zn domain (Zn_SUZ12)	Polycomb protein SUZ12-like, Zn domain	This entry represents the C2H2-type zinc finger domain (Zn) of human Polycomb protein SUZ12, a component of the PRC2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. This ...	This entry represents the C2H2-type zinc finger domain (Zn) of human Polycomb protein SUZ12, a component of the PRC2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene. This domain is necessary to mediate stable binding of the TR domain of Jarid2, another component of the PRC2 complex, and the C-terminal domain of EPOP (C17orf96, a scaffold protein that bridges with the elongin BC complex). It shows a beta -sheet and an alpha helix on one side [1]. This entry is often found associated with Pfam:PF09733.	Domain
A [auth I]	PF18264	CXC domain (preSET_CXC)	CXC domain	This domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain.	Domain
A [auth I]	PF00856	SET domain (SET)	SET domain	-	Family
A [auth I]	PF18118	Polycomb repressive complex 2 tri-helical domain (PRC2_HTH_1)	Polycomb repressive complex 2 tri-helical domain	This domain can be found in the Polycomb repressive complex 2 (PRC2) present in Homo sapiens. Polycomb complexes maintain repressive chromatin states by silencing gene expression. PRC2 does this by methylating lysine 27 of histone H3. This domain mak ...	This domain can be found in the Polycomb repressive complex 2 (PRC2) present in Homo sapiens. Polycomb complexes maintain repressive chromatin states by silencing gene expression. PRC2 does this by methylating lysine 27 of histone H3. This domain makes up part of the N-lobe which is involved in regulation [1].	Domain
A [auth I]	PF11616	WD repeat binding protein EZH2 (EZH2_WD-Binding)	WD repeat binding protein EZH2	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth D]	Polycomb protein EED	transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity identical protein binding chromatin binding promoter-specific chromatin binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process multicellular organism development multicellular organismal process spinal cord development central nervous system development anatomical structure development nervous system development animal gross anatomical part developmental process system development cellular component organization cellular component biogenesis cellular component assembly chromatin organization chromatin remodeling cellular component organization or biogenesis heterochromatin formation epigenetic regulation of gene expression heterochromatin organization negative regulation of gene expression facultative heterochromatin formation negative regulation of gene expression, epigenetic transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II	membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle chromatin silencing complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle pronucleus sex chromosome intracellular membraneless organelle chromatin membrane-bounded organelle intracellular organelle protein-containing complex cellular anatomical structure intracellular anatomical structure organelle chromatin silencing complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle pronucleus sex chromosome intracellular membraneless organelle chromatin chromosome heterochromatin sex chromatin membraneless organelle histone methyltransferase complex catalytic complex membrane-enclosed lumen transferase complex intracellular organelle lumen PcG protein complex nucleoplasm organelle lumen methyltransferase complex ESC/E(Z) complex nuclear lumen
G [auth K]	RB binding protein 4, chromatin remodeling factor,Histone-binding protein RBBP4	protein binding binding histone binding histone deacetylase binding enzyme binding DNA binding sequence-specific DNA binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding protein binding binding histone binding histone deacetylase binding enzyme binding DNA binding sequence-specific DNA binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding	regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process DNA replication DNA metabolic process developmental process multicellular organismal process head development animal organ development brain development nervous system development multicellular organism development central nervous system development anatomical structure development animal gross anatomical part developmental process system development regulation of developmental process cellular developmental process regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation regulation of cell fate commitment cell fate specification regulation of cell fate specification cell fate commitment positive regulation of biological process regulation of stem cell population maintenance stem cell population maintenance positive regulation of developmental process positive regulation of stem cell population maintenance positive regulation of multicellular organismal process regulation of multicellular organismal process maintenance of cell number protein-containing complex organization protein-DNA complex assembly cellular component organization protein-DNA complex organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular component organization or biogenesis nucleosome assembly nucleosome organization cellular response to stimulus negative regulation of transforming growth factor beta receptor signaling pathway cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus response to stimulus negative regulation of signaling signaling cellular response to transforming growth factor beta stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway regulation of signal transduction negative regulation of cell communication cell communication regulation of transforming growth factor beta receptor signaling pathway cellular response to endogenous stimulus signal transduction enzyme-linked receptor protein signaling pathway regulation of signaling cell surface receptor signaling pathway negative regulation of response to stimulus regulation of cellular response to transforming growth factor beta stimulus response to endogenous stimulus regulation of cellular response to growth factor stimulus negative regulation of signal transduction response to transforming growth factor beta regulation of response to stimulus transforming growth factor beta receptor signaling pathway regulation of cell communication response to growth factor transforming growth factor beta receptor superfamily signaling pathway negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway cellular response to stress DNA damage response response to stress DNA repair DNA replication-dependent chromatin assembly negative regulation of locomotion regulation of cell motility regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation heterochromatin formation epigenetic regulation of gene expression heterochromatin organization negative regulation of gene expression negative regulation of gene expression, epigenetic positive regulation of DNA-templated transcription positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process negative regulation of developmental process negative regulation of stem cell population maintenance negative regulation of multicellular organismal process transcription by RNA polymerase II regulation of transcription by RNA polymerase II negative regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II	protein-containing complex CAF-1 complex membrane-bounded organelle intracellular anatomical structure catalytic complex Sin3-type complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome chromatin intracellular membrane-bounded organelle protein-containing complex CAF-1 complex membrane-bounded organelle intracellular anatomical structure catalytic complex Sin3-type complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome chromatin intracellular membrane-bounded organelle intracellular organelle lumen histone deacetylase complex intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle nuclear lumen histone methyltransferase complex transferase complex PcG protein complex methyltransferase complex ESC/E(Z) complex ATPase complex transcription regulator complex NuRD complex SWI/SNF superfamily-type complex CHD-type complex chromosome, telomeric region chromosomal region NURF complex ISWI-type complex
F	Zinc finger protein AEBP2	DNA binding binding nucleic acid binding transcription regulator activity transcription coregulator activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	regulation of cellular process negative regulation of biological process cellular component organization cellular component biogenesis cellular component assembly chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression regulation of cellular process negative regulation of biological process cellular component organization cellular component biogenesis cellular component assembly chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process biological regulation heterochromatin organization regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process cellular process negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II primary metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process regulation of DNA-templated transcription negative regulation of RNA biosynthetic process negative regulation of nucleobase-containing compound metabolic process negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of RNA metabolic process	membrane-bounded organelle protein-containing complex histone methyltransferase complex intracellular anatomical structure catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex intracellular organelle cellular anatomical structure membrane-bounded organelle protein-containing complex histone methyltransferase complex intracellular anatomical structure catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle methyltransferase complex ESC/E(Z) complex nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome
E [auth O]	Polycomb protein SUZ12	transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding histone H3K9me2/3 reader activity histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity RNA binding lncRNA binding nucleic acid binding transcription factor binding transcription coregulator binding transcription corepressor binding protein binding binding histone H3K9me2/3 reader activity histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity RNA binding lncRNA binding nucleic acid binding DNA binding sequence-specific DNA binding double-stranded DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding chromatin binding promoter-specific chromatin binding enzyme regulator activity enzyme activator activity molecular function activator activity molecular function regulator activity chromatin DNA binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of cellular process negative regulation of biological process cellular component organization cellular component biogenesis cellular component assembly chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process biological regulation heterochromatin organization regulation of macromolecule metabolic process regulation of gene expression negative regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process facultative heterochromatin formation negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process regulation of metabolic process developmental process regulation of developmental process cellular developmental process negative regulation of developmental process regulation of cell differentiation cell differentiation negative regulation of cell differentiation regulation of primary metabolic process negative regulation of RNA biosynthetic process regulation of RNA metabolic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II regulation of DNA-templated transcription negative regulation of RNA metabolic process	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen RSC-type complex ATPase complex protein-containing complex catalytic complex nuclear protein-containing complex chromatin chromosome SWI/SNF superfamily-type complex sex chromosome heterochromatin sex chromatin histone methyltransferase complex transferase complex PcG protein complex nucleoplasm methyltransferase complex ESC/E(Z) complex chromatin silencing complex protein-DNA complex ribonucleoprotein complex nuclear body
B [auth C], D [auth E]	H3K27me3	-	-	-
A [auth I]	Histone-lysine N-methyltransferase EZH2	protein-lysine N-methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups lysine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity protein binding binding histone binding RNA binding protein-lysine N-methyltransferase activity catalytic activity, acting on a protein transferase activity, transferring one-carbon groups lysine N-methyltransferase activity protein methyltransferase activity N-methyltransferase activity transferase activity methyltransferase activity catalytic activity S-adenosylmethionine-dependent methyltransferase activity protein binding binding histone binding RNA binding lncRNA binding nucleic acid binding histone H3K27 trimethyltransferase activity histone H3 methyltransferase activity histone H3K27 methyltransferase activity histone methyltransferase activity histone modifying activity primary miRNA binding chromatin binding promoter-specific chromatin binding DNA binding sequence-specific DNA binding double-stranded DNA binding core promoter sequence-specific DNA binding RNA polymerase II core promoter sequence-specific DNA binding RNA polymerase II transcription regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding transcription factor binding transcription coregulator binding transcription corepressor binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding ribonucleoprotein complex binding protein-containing complex binding transcription corepressor activity transcription regulator activity transcription coregulator activity chromatin DNA binding nucleosome binding	methylation metabolic process cellular process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process methylation metabolic process cellular process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process macromolecule metabolic process regulation of cellular process regulation of primary metabolic process regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation regulation of macromolecule metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process subtelomeric heterochromatin formation negative regulation of biological process cellular component organization cellular component biogenesis cellular component assembly chromatin organization negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process heterochromatin formation epigenetic regulation of gene expression negative regulation of metabolic process heterochromatin organization negative regulation of gene expression constitutive heterochromatin formation negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic cellular response to stimulus intracellular receptor signaling pathway response to stimulus signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of retinoic acid receptor signaling pathway regulation of signal transduction hormone-mediated signaling pathway intracellular signal transduction negative regulation of cell communication cell communication cellular response to endogenous stimulus response to hormone regulation of intracellular signal transduction signal transduction cellular response to hormone stimulus regulation of signaling negative regulation of response to stimulus response to endogenous stimulus negative regulation of retinoic acid receptor signaling pathway retinoic acid receptor signaling pathway negative regulation of signal transduction cellular response to chemical stimulus regulation of response to stimulus response to chemical regulation of cell communication nuclear receptor-mediated signaling pathway regulation of protein modification process positive regulation of phosphorylation regulation of catalytic activity regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process regulation of transferase activity positive regulation of phosphate metabolic process positive regulation of protein serine/threonine kinase activity positive regulation of metabolic process positive regulation of molecular function positive regulation of protein modification process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein kinase activity protein modification process positive regulation of protein phosphorylation positive regulation of cellular process protein phosphorylation phosphorylation regulation of protein metabolic process positive regulation of catalytic activity regulation of protein kinase activity regulation of molecular function positive regulation of kinase activity regulation of kinase activity macromolecule modification regulation of protein serine/threonine kinase activity regulation of phosphorylation negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of RNA metabolic process developmental process multicellular organismal process head development forebrain development animal organ development brain development nervous system development pallium development multicellular organism development central nervous system development anatomical structure development telencephalon development hippocampus development animal gross anatomical part developmental process limbic system development system development cellular developmental process hemopoiesis B cell activation cell activation cell development mononuclear cell differentiation lymphocyte differentiation lymphocyte activation leukocyte activation B cell differentiation cell differentiation immune system process leukocyte differentiation rhythmic process circadian rhythm regulation of circadian rhythm regulation of epithelial to mesenchymal transition regulation of developmental process positive regulation of epithelial to mesenchymal transition regulation of cell differentiation mesenchyme development positive regulation of developmental process positive regulation of cell differentiation regulation of multicellular organismal process tissue development epithelial to mesenchymal transition positive regulation of multicellular organismal process mesenchymal cell differentiation positive regulation of hydrolase activity regulation of hydrolase activity regulation of GTPase activity positive regulation of GTPase activity cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation positive regulation of cell communication positive regulation of signal transduction regulation of MAP kinase activity intracellular signaling cassette positive regulation of MAP kinase activity positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade positive regulation of response to stimulus MAPK cascade positive regulation of signaling facultative heterochromatin formation positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cell projection organization neuron projection development neurogenesis neuron differentiation dendrite development positive regulation of neuron projection development positive regulation of cell projection organization plasma membrane bounded cell projection organization regulation of cell projection organization positive regulation of dendrite development generation of neurons regulation of dendrite development neuron development regulation of plasma membrane bounded cell projection organization regulation of cell cycle phase transition regulation of cell cycle process cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition positive regulation of cell cycle positive regulation of cell cycle G1/S phase transition positive regulation of cell cycle phase transition positive regulation of cell cycle process cell cycle regulation of cell cycle cell cycle process trans-synaptic signaling synaptic transmission, GABAergic cell-cell signaling chemical synaptic transmission synaptic signaling anterograde trans-synaptic signaling regulation of kidney development renal system development kidney development regulatory ncRNA-mediated gene silencing regulatory ncRNA-mediated heterochromatin formation response to lipid response to estradiol response to oxygen-containing compound regulation of cytokine production involved in inflammatory response response to stress cytokine production regulation of cytokine production negative regulation of cytokine production involved in inflammatory response production of molecular mediator involved in inflammatory response defense response negative regulation of cytokine production cytokine production involved in inflammatory response inflammatory response negative regulation of multicellular organismal process	membrane-bounded organelle protein-containing complex histone methyltransferase complex intracellular anatomical structure catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex intracellular organelle cellular anatomical structure membrane-bounded organelle protein-containing complex histone methyltransferase complex intracellular anatomical structure catalytic complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex intracellular organelle lumen PcG protein complex intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle methyltransferase complex ESC/E(Z) complex nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome heterochromatin chromosome, telomeric region chromosomal region pericentric heterochromatin chromosome, centromeric region chromatin silencing complex pronucleus synapse cell junction

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth D]	IPR019775	WD40 repeat, conserved site	Conserved Site
C [auth D]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
C [auth D]	IPR001680	WD40 repeat	Repeat
C [auth D]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
C [auth D]	IPR051243	Polycomb group WD repeat-containing protein	Family
G [auth K]	IPR050459	WD repeat RBAP46/RBAP48/MSI1	Family
G [auth K]	IPR019775	WD40 repeat, conserved site	Conserved Site
G [auth K]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
G [auth K]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
G [auth K]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
G [auth K]	IPR022052	Histone-binding protein RBBP4-like, N-terminal	Domain
G [auth K]	IPR001680	WD40 repeat	Repeat
F	IPR059034	AEBP2-like, C-terminal SH3 domain	Domain
F	IPR013087	Zinc finger C2H2-type	Domain
F	IPR036236	Zinc finger C2H2 superfamily	Homologous Superfamily
F	IPR052130	AEBP2/jing C2H2-type zinc-finger	Family
E [auth O]	IPR019135	Polycomb protein, VEFS-Box	Domain
E [auth O]	IPR057540	Polycomb protein SUZ12-like, zinc finger domain	Domain
A [auth I]	IPR048358	EZH1/2, MCSS domain	Domain
A [auth I]	IPR021654	Histone-lysine N-methyltransferase EZH1/EZH2, N-terminal	Domain
A [auth I]	IPR041343	Polycomb repressive complex 2 subunit EZH1/EZH2, tri-helical domain	Domain
A [auth I]	IPR046341	SET domain superfamily	Homologous Superfamily
A [auth I]	IPR001214	SET domain	Domain
A [auth I]	IPR045318	Histone-lysine N-methyltransferase EZH1/2-like	Family
A [auth I]	IPR033467	Tesmin/TSO1-like CXC domain	Domain
A [auth I]	IPR044439	EZH2, SET domain	Domain
A [auth I]	IPR026489	CXC domain	Domain
A [auth I]	IPR041355	Pre-SET CXC domain	Domain
A [auth I]	IPR001005	SANT/Myb domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth D]	: O75530	schwannoma Cohen-Gibson syndrome malignant peripheral nerve sheath tumor perineurioma attention deficit hyperactivity disorder, inattentive type intellectual disability Nerve Sheath Tumors peripheral nervous system neoplasm Weaver syndrome epithelioid sarcoma cataract follicular lymphoma nerve sheath neoplasm
G [auth K]	: Q09028	medulloblastoma Pick disease osteosarcoma subependymal giant cell astrocytoma ovarian cancer
F	: Q6ZN18	atypical teratoid rhabdoid tumor sarcoidosis juvenile dermatomyositis respiratory system disease
E [auth O]	: Q15022	malignant glioma endometrioid stromal sarcoma schwannoma melanoma neurofibroma cancer glioblastoma mixed glioma adenoma perineurioma endometrial carcinoma giant cell glioblastoma malignant peripheral nerve sheath tumor microcystic adenoma papillary adenoma malignant glioma endometrioid stromal sarcoma schwannoma melanoma neurofibroma cancer glioblastoma mixed glioma adenoma perineurioma endometrial carcinoma giant cell glioblastoma malignant peripheral nerve sheath tumor microcystic adenoma papillary adenoma follicular thyroid adenoma glioma melanocytic nevus Nerve Sheath Tumors breast cancer ovarian cancer cystic fibrosis Pick disease lung cancer myopathy astrocytic tumor oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma dermatomyositis plasma cell myeloma endometrium neoplasm malignant ependymoma medulloblastoma nerve sheath neoplasm neurofibromatosis osteosarcoma cutaneous melanoma endometrial cancer peripheral nervous system neoplasm progressive supranuclear palsy Weaver syndrome
A [auth I]	: Q15910	Weaver syndrome follicular lymphoma osteosarcoma diffuse large B-cell lymphoma prostate cancer breast carcinoma myelodysplastic syndrome juvenile myelomonocytic leukemia primary myelofibrosis craniosynostosis Upper Extremity Deformities, Congenital endometrial carcinoma breast cancer malignant mesothelioma myelodysplastic/myeloproliferative Neoplasm Weaver syndrome follicular lymphoma osteosarcoma diffuse large B-cell lymphoma prostate cancer breast carcinoma myelodysplastic syndrome juvenile myelomonocytic leukemia primary myelofibrosis craniosynostosis Upper Extremity Deformities, Congenital endometrial carcinoma breast cancer malignant mesothelioma myelodysplastic/myeloproliferative Neoplasm inflammatory bowel disease non-small cell lung carcinoma ovarian cancer aleukemic leukemia invasive ductal breast carcinoma pilocytic astrocytoma lung disease psoriasis Sjogren syndrome chronic myelomonocytic leukemia cystic fibrosis malignant ependymoma ductal breast carcinoma in situ glioblastoma hepatocellular carcinoma myelofibrosis adrenal cortex carcinoma intellectual disability oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma astrocytic tumor lung adenocarcinoma prostate disease breast disease lymphatic system disease congenital anemia trigonocephaly malignant glioma endometrial cancer malignant pancreatic neoplasm epithelioid sarcoma medulloblastoma hematologic disease IgA glomerulonephritis nasopharyngeal carcinoma interstitial cystitis pancreatic intraductal papillary-mucinous neoplasm atypical teratoid rhabdoid tumor large cell medulloblastoma primitive neuroectodermal tumor lung cancer cancer lymphoma sinusitis

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B [auth C], D [auth E]	M3L	Parent Component: LYS : AA0074 : N6,N6,N6-trimethyl-L-lysine MOD:00083

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.