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 9J92 | pdb_00009j92

Native GluA1/GluA4-CNIH3 complex in resting state

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
EMFS_1e9j92E1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: MFS_1ECOD (v295.2)
ALig_chane9j92A1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Lig_chanECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E,
F [auth H],
G,
H [auth F]		PF03311Cornichon protein (Cornichon)Cornichon protein- Family
B [auth D],
D [auth B]		PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
B [auth D],
D [auth B]		PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain
A, C
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
A, C
PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E,
F [auth H],
G,
H [auth F]		Cornichon family AMPA receptor auxiliary protein 3
B [auth D],
D [auth B]		Glutamate receptor
A, C
Glutamate receptor -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E,
F [auth H],
G,
H [auth F]		IPR033466Cornichon, conserved siteConserved Site
E,
F [auth H],
G,
H [auth F]		IPR003377CornichonFamily
B [auth D],
D [auth B]		IPR028082Periplasmic binding protein-like IHomologous Superfamily
B [auth D],
D [auth B]		IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain
B [auth D],
D [auth B]		IPR015683Ionotropic glutamate receptorFamily
B [auth D],
D [auth B]		IPR001508Ionotropic glutamate receptor, metazoaFamily
B [auth D],
D [auth B]		IPR001320Ionotropic glutamate receptor, C-terminalDomain
B [auth D],
D [auth B]		IPR001828Receptor, ligand binding regionDomain
A, C
IPR015683Ionotropic glutamate receptorFamily
A, C
IPR001508Ionotropic glutamate receptor, metazoaFamily
A, C
IPR028082Periplasmic binding protein-like IHomologous Superfamily
A, C
IPR001320Ionotropic glutamate receptor, C-terminalDomain
A, C
IPR001828Receptor, ligand binding regionDomain
A, C
IPR019594Ionotropic glutamate receptor, L-glutamate and glycine-binding domainDomain