Structure of Far-Red Photosystem I from C. thermalis PCC 7203
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| U [auth V] | RVT_1 | e9i9lV1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| I [auth K] | RVT_1 | e9i9lK1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| GA [auth i] | e9i9li1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| T [auth U] | RVT_1 | e9i9lU1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| H [auth J] | RVT_1 | e9i9lJ1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| FA [auth h] | e9i9lh1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| S [auth T] | RVT_1 | e9i9lT1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| G [auth I] | RVT_1 | e9i9lI1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| EA [auth g] | e9i9lg1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| R [auth S] | RVT_1 | e9i9lS1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| F | RVT_1 | e9i9lF1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| DA [auth f] | e9i9lf1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| Q [auth R] | Sec23_trunk | e9i9lR1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
| E | Sec23_trunk | e9i9lE1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
| CA [auth e] | Sec23_trunk | e9i9le1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Sec23_trunk | ECOD (v295.2) |
| P [auth Q] | RVT_1 | e9i9lQ1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| D | RVT_1 | e9i9lD1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| BA [auth d] | e9i9ld1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| O [auth P] | PCI | e9i9lP1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| C | PCI | e9i9lC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| AA [auth c] | PCI | e9i9lc1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: PCI | ECOD (v295.2) |
| Z [auth b] | FliD_C | e9i9lb1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: FliD_C | ECOD (v295.2) |
| N [auth O] | FliD_C | e9i9lO1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: FliD_C | ECOD (v295.2) |
| B | FliD_C | e9i9lB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: FliD_C | ECOD (v295.2) |
| X [auth Z] | RVT_1 | e9i9lZ1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| L [auth X] | RVT_1 | e9i9lX1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| JA [auth l] | e9i9ll1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| W [auth Y] | RVT_1 | e9i9lY1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| K [auth M] | RVT_1 | e9i9lM1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| IA [auth k] | e9i9lk1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| V [auth W] | RVT_1 | e9i9lW1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| J [auth L] | RVT_1 | e9i9lL1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: RVT_1 | ECOD (v295.2) |
| HA [auth j] | e9i9lj1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| Y [auth a] | e9i9la1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| M [auth N] | e9i9lN1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) | |
| A | e9i9lA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| GA [auth i], I [auth K], U [auth V] | PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family |
| FA [auth h], H [auth J], T [auth U] | PF01701 | Photosystem I reaction centre subunit IX / PsaJ (PSI_PsaJ) | Photosystem I reaction centre subunit IX / PsaJ | - | Family |
| FA [auth h], H [auth J], T [auth U] | PF02605 | Photosystem I reaction centre subunit XI (PsaL) | Photosystem I reaction centre subunit XI | - | Family |
| EA [auth g], G [auth I], S [auth T] | PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family |
| DA [auth f], F, R [auth S] | PF02507 | Photosystem I reaction centre subunit III (PSI_PsaF) | Photosystem I reaction centre subunit III | - | Family |
| CA [auth e], E, Q [auth R] | PF02427 | Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE) | Photosystem I reaction centre subunit IV / PsaE | PsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. | Domain |
| BA [auth d], D, P [auth Q] | PF02531 | PsaD (PsaD) | PsaD | - | Family |
| AA [auth c], C, O [auth P] | PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain |
| B, N [auth O], Z [auth b] | PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
| JA [auth l], L [auth X], X [auth Z] | PF08078 | PsaX family (PsaX) | PsaX family | - | Family |
| IA [auth k], K [auth M], W [auth Y] | PF07465 | Photosystem I protein M (PsaM) (PsaM) | Photosystem I protein M (PsaM) | - | Family |
| HA [auth j], J [auth L], V [auth W] | PF02605 | Photosystem I reaction centre subunit XI (PsaL) | Photosystem I reaction centre subunit XI | - | Family |
| HA [auth j], J [auth L], V [auth W] | PF08078 | PsaX family (PsaX) | PsaX family | - | Family |
| A, M [auth N], Y [auth a] | PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |