320 A SynPspA rod after incubation with EPL
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| ZA [auth r] | Beta-Casp | e9i00r1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| Z [auth R] | Beta-Casp | e9i00R1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| YA [auth q] | Beta-Casp | e9i00q1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| Y [auth Q] | Beta-Casp | e9i00Q1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| XA [auth p] | Beta-Casp | e9i00p1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| X [auth P] | Beta-Casp | e9i00P1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| WA [auth o] | Beta-Casp | e9i00o1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| W [auth O] | Beta-Casp | e9i00O1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| VA [auth n] | Beta-Casp | e9i00n1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| V [auth N] | Beta-Casp | e9i00N1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| UA [auth m] | Beta-Casp | e9i00m1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| U [auth M] | Beta-Casp | e9i00M1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| TA [auth l] | Beta-Casp | e9i00l1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| T [auth L] | Beta-Casp | e9i00L1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| SA [auth k] | Beta-Casp | e9i00k1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| S [auth K] | Beta-Casp | e9i00K1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| RA [auth j] | Beta-Casp | e9i00j1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| R [auth J] | Beta-Casp | e9i00J1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| QA [auth i] | Beta-Casp | e9i00i1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| Q [auth I] | Beta-Casp | e9i00I1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| PA [auth h] | Beta-Casp | e9i00h1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| P [auth H] | Beta-Casp | e9i00H1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| OA [auth g] | Beta-Casp | e9i00g1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| O [auth G] | Beta-Casp | e9i00G1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| NA [auth f] | Beta-Casp | e9i00f1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| N [auth F] | Beta-Casp | e9i00F1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| MA [auth e] | Beta-Casp | e9i00e1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| M [auth E] | Beta-Casp | e9i00E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| LA [auth d] | Beta-Casp | e9i00d1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| L [auth D] | Beta-Casp | e9i00D1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| KA [auth c] | Beta-Casp | e9i00c1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| K [auth C] | Beta-Casp | e9i00C1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| JA [auth b] | Beta-Casp | e9i00b1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| J [auth B] | Beta-Casp | e9i00B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| IA [auth a] | Beta-Casp | e9i00a1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| I [auth A] | Beta-Casp | e9i00A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| HB [auth z] | Beta-Casp | e9i00z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| HA [auth Z] | Beta-Casp | e9i00Z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| H [auth 7] | Beta-Casp | e9i0071 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| GB [auth y] | Beta-Casp | e9i00y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| GA [auth Y] | Beta-Casp | e9i00Y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| G [auth 6] | Beta-Casp | e9i0061 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| FB [auth x] | Beta-Casp | e9i00x1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| FA [auth X] | Beta-Casp | e9i00X1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| F [auth 5] | Beta-Casp | e9i0051 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| EB [auth w] | Beta-Casp | e9i00w1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| EA [auth W] | Beta-Casp | e9i00W1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| E [auth 4] | Beta-Casp | e9i0041 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| DB [auth v] | Beta-Casp | e9i00v1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| DA [auth V] | Beta-Casp | e9i00V1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| D [auth 3] | Beta-Casp | e9i0031 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| CB [auth u] | Beta-Casp | e9i00u1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| CA [auth U] | Beta-Casp | e9i00U1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| C [auth 2] | Beta-Casp | e9i0021 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| BB [auth t] | Beta-Casp | e9i00t1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| BA [auth T] | Beta-Casp | e9i00T1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| B [auth 1] | Beta-Casp | e9i0011 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| AB [auth s] | Beta-Casp | e9i00s1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| AA [auth S] | Beta-Casp | e9i00S1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| A [auth 0] | Beta-Casp | e9i0001 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04012 | PspA/IM30 family (PspA_IM30) | PspA/IM30 family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Chloroplast membrane-associated 30 kD protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR007157 | PspA/VIPP1 | Family |














