Cryo-EM structure of Arabidopsis thaliana PSI-LHCI wild-type
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H [auth D] | SCOP2B Superfamily | Photosystem I subunit PsaD | 8107004 | 3000951 | SCOP2B (2022-06-29) |
| G [auth C] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8106962 | 3000020 | SCOP2B (2022-06-29) |
| D [auth 4] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8106944 | 3000343 | SCOP2B (2022-06-29) |
| C [auth 3] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8107012 | 3000343 | SCOP2B (2022-06-29) |
| B [auth 2] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8107014 | 3000343 | SCOP2B (2022-06-29) |
| O [auth L] | SCOP2B Superfamily | Photosystem I reaction center subunit XI, PsaL | 8107008 | 3000870 | SCOP2B (2022-06-29) |
| M [auth I] | SCOP2B Superfamily | Subunit VIII of photosystem I reaction centre, PsaI | 8106958 | 3000819 | SCOP2B (2022-06-29) |
| J [auth F] | SCOP2B Superfamily | Subunit III of photosystem I reaction centre, PsaF | 8107006 | 3000813 | SCOP2B (2022-06-29) |
| A [auth 1] | SCOP2B Superfamily | Chlorophyll a-b binding protein | 8076986 | 3000343 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G [auth C] | Beta-Casp | e9gbiC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| D [auth 4] | Cry1Ac_D5 | e9gbi41 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Cry1Ac_D5 | ECOD (v295.2) |
| C [auth 3] | Peripla_BP_3 | e9gbi31 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Peripla_BP_3 | ECOD (v295.2) |
| B [auth 2] | 2OG-FeII_Oxy,DIOX_N | e9gbi21 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: 2OG-FeII_Oxy,DIOX_N | ECOD (v295.2) |
| M [auth I] | Beta-Casp | e9gbiI1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth E] | PF02427 | Photosystem I reaction centre subunit IV / PsaE (PSI_PsaE) | Photosystem I reaction centre subunit IV / PsaE | PsaE is a 69 amino acid polypeptide from photosystem I present on the stromal side of the thylakoid membrane [1]. The structure is comprised of a well-defined five-stranded beta-sheet similar to SH3 domains [1]. | Domain |
| H [auth D] | PF02531 | PsaD (PsaD) | PsaD | - | Family |
| G [auth C] | PF14697 | 4Fe-4S dicluster domain (Fer4_21) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain |
| D [auth 4] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| C [auth 3] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| B [auth 2] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |
| P [auth K] | PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family |
| M [auth I] | PF00796 | Photosystem I reaction centre subunit VIII (PSI_8) | Photosystem I reaction centre subunit VIII | - | Family |
| J [auth F] | PF02507 | Photosystem I reaction centre subunit III (PSI_PsaF) | Photosystem I reaction centre subunit III | - | Family |
| A [auth 1] | PF00504 | Chlorophyll A-B binding protein (Chloroa_b-bind) | Chlorophyll A-B binding protein | - | Family |














