Annotations: 9FMN

Structure of Human PADI6

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e9fmnA01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08527	Protein-arginine deiminase (PAD) middle domain (PAD_M)	Protein-arginine deiminase (PAD) middle domain	This family represents the central non-catalytic domain of protein-arginine deiminase. This domain has an immunoglobulin-like fold.	Domain
A, B	PF03068	Protein-arginine deiminase (PAD) (PAD)	Protein-arginine deiminase (PAD)	-	Family
A, B	PF08526	Protein-arginine deiminase (PAD) N-terminal domain (PAD_N)	Protein-arginine deiminase (PAD) N-terminal domain	This family represents the N-terminal non-catalytic domain of protein-arginine deiminase. This domain has a cupredoxin-like fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Protein-arginine deiminase type-6	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding structural molecule activity structural constituent of cytoplasmic lattice cytoskeletal protein binding protein binding tubulin binding identical protein binding	cellular component organization organelle organization cellular process cellular component organization or biogenesis cytoskeleton organization developmental process multicellular organism development multicellular organismal process embryonic cleavage anatomical structure development cell division embryo development regulation of biosynthetic process epigenetic programming of gene expression cellular component organization organelle organization cellular process cellular component organization or biogenesis cytoskeleton organization developmental process multicellular organism development multicellular organismal process embryonic cleavage anatomical structure development cell division embryo development regulation of biosynthetic process epigenetic programming of gene expression regulation of biological process regulation of cellular process epigenetic programming in the zygotic pronuclei epigenetic regulation of gene expression biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process chromatin organization chromatin remodeling regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process protein storage nutrient storage protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression localization regulation of translation by machinery localization protein metabolic process intracellular protein localization regulation of protein metabolic process primary metabolic process translation regulation of translation macromolecule localization cytoplasm organization embryo development ending in birth or egg hatching chordate embryonic development in utero embryonic development	cytoplasmic lattice ooplasm intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle cytoplasm membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle endomembrane system cytoplasmic vesicle cytoplasmic lattice ooplasm intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle cytoplasm membrane-bounded organelle intracellular vesicle intracellular membrane-bounded organelle endomembrane system cytoplasmic vesicle secretory granule secretory vesicle vesicle cortical granule cytoskeleton intermediate filament cytoskeleton nucleus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR038685	PAD, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR013530	Protein-arginine deiminase, C-terminal	Domain
A, B	IPR013732	Protein-arginine deiminase (PAD), N-terminal	Domain
A, B	IPR036556	Protein-arginine deiminase, central domain superfamily	Homologous Superfamily
A, B	IPR013733	Protein-arginine deiminase (PAD), central domain	Domain
A, B	IPR008972	Cupredoxin	Homologous Superfamily
A, B	IPR004303	Protein-arginine deiminase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: Q6TGC4	preimplantation embryonic lethality 2 skin basal cell carcinoma rheumatoid arthritis

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.