Annotations: 9EVT

Structure of the small subunit of the flowering plant mitoribosome with the maturation factor RsgA

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
R	SCOP2B Superfamily	Ribosomal protein S19	8095341	3000686	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ribosomal_S9	e9evtA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S9	ECOD (v295.2)
D	Ribosomal_S9	e9evtD1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S9	ECOD (v295.2)
E	Ribosomal_S9	e9evtE1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S9	ECOD (v295.2)
G	Ribosomal_S9	e9evtG1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S9	ECOD (v295.2)
H	Ribosomal_S9	e9evtH1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S9	ECOD (v295.2)
I	Ribosomal_S18	e9evtI1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
J	Ribosomal_S18	e9evtJ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
K	Ribosomal_S18	e9evtK1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
O	Ribosomal_S18	e9evtO1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
P	Ribosomal_S18	e9evtP1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
Q	Ribosomal_S18	e9evtQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
U	MRP-S33	e9evtU1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MRP-S33	ECOD (v295.2)
V	MRP-S33	e9evtV1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MRP-S33	ECOD (v295.2)
W	MRP-S33	e9evtW1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MRP-S33	ECOD (v295.2)
Z	Ribosomal_S13	e9evtZ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S13	ECOD (v295.2)
CA [auth b]	Ribosomal_S13	e9evtb1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S13	ECOD (v295.2)
EA [auth d]	Ribosomal_S13	e9evtd1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S13	ECOD (v295.2)
GA [auth f]	Ribosomal_S13	e9evtf1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S13	ECOD (v295.2)
HA [auth h]	Ribosomal_S13	e9evth1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S13	ECOD (v295.2)
F	Ribosomal_S9	e9evtF1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S9	ECOD (v295.2)
Y	MRP-S33	e9evtY1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MRP-S33	ECOD (v295.2)
S	MRP-S33	e9evtS1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MRP-S33	ECOD (v295.2)
R	MRP-S33	e9evtR1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: MRP-S33	ECOD (v295.2)
N	Ribosomal_S18	e9evtN1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
M	Ribosomal_S18	e9evtM1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)
L	Ribosomal_S18	e9evtL1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: Ribosomal_S18	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
B	PF16860	CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, (CX9C)	CHCH-CHCH-like Cx9C, IMS import disulfide relay-system,	CX9C is the first half of a twin Cx9C motif in eukaryotic proteins. The function of this motif is to import nuclear-encoded mitochondrial intermembrane-space-proteins into the IMS (intermembrane space), as these latter lack a mitochondrial targeting ...	CX9C is the first half of a twin Cx9C motif in eukaryotic proteins. The function of this motif is to import nuclear-encoded mitochondrial intermembrane-space-proteins into the IMS (intermembrane space), as these latter lack a mitochondrial targeting sequence. The Cx9C proteins have a disulfide-bonded alpha-hairpin conformation. Cx9C-containing proteins are thus putative substrates for the Mia40-dependent thiol-disulfide exchange mechanism that carries out an oxidative folding process resulting in the proteins being trapped in the IMS [1].	Domain
D	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain		Domain
D	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain		Domain
E	PF01250	Ribosomal protein S6 (Ribosomal_S6)	Ribosomal protein S6		Domain
I	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain
O	PF00886	Ribosomal protein S16 (Ribosomal_S16)	Ribosomal protein S16	-	Family
Q	PF01084	Ribosomal protein S18 (Ribosomal_S18)	Ribosomal protein S18	-	Family
AA [auth 7]	PF03193	RsgA GTPase (RsgA_GTPase)	RsgA GTPase	RsgA (also known as EngC and YjeQ) represents a protein family whose members are broadly conserved in bacteria and are indispensable for growth. The GTPase domain of RsgA is very similar to several P-loop GTPases, but differs in having a circular per ...	RsgA (also known as EngC and YjeQ) represents a protein family whose members are broadly conserved in bacteria and are indispensable for growth. The GTPase domain of RsgA is very similar to several P-loop GTPases, but differs in having a circular permutation of the GTPase structure described by a G4-G1-G3 pattern [1].	Domain
S	PF01165	Ribosomal protein S21 (Ribosomal_S21)	Ribosomal protein S21	-	Family
R	PF00076	RNA recognition motif (RRM_1)	RNA recognition motif	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...	The RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and protein components of snRNPs. The motif also appears in a few single stranded DNA binding proteins. The RRM structure consists of four strands and two helices arranged in an alpha/beta sandwich, with a third helix present during RNA binding in some cases The C-terminal beta strand (4th strand) and final helix are hard to align and have been omitted in the SEED alignment The LA proteins (Swiss:P05455) have an N terminal rrm which is included in the seed. There is a second region towards the C terminus that has some features characteristic of a rrm but does not appear to have the important structural core of a rrm. The LA proteins (Swiss:P05455) are one of the main autoantigens in Systemic lupus erythematosus (SLE), an autoimmune disease.	Domain
R	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19		Domain
N	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
L	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ribosomal protein S2	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
B	Small ribosomal subunit protein uS3m	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
D	S5 DRBM domain-containing protein	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
E	bS6m	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
G	40S ribosomal protein S15a	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membraneless organelle intracellular membraneless organelle ribosome
H	30S ribosomal protein S9	-	-	-
I	Small ribosomal subunit protein uS10 domain-containing protein	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
J	Ribosomal protein S11	-	-	-
K	Small ribosomal subunit protein uS12m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome
O	30S ribosomal protein S16	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome plastid chloroplast
P	Small ribosomal subunit protein uS17c	-	-	-
Q	Small ribosomal subunit protein bS18c	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
T	30S ribosomal protein S31, mitochondrial	-	primary metabolic process plastid translation translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization organelle organization plastid organization biosynthetic process cellular process metabolic process cellular component organization or biogenesis protein metabolic process primary metabolic process plastid translation translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization organelle organization plastid organization biosynthetic process cellular process metabolic process cellular component organization or biogenesis protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle membraneless organelle intracellular membraneless organelle ribosome
U	Small ribosomal subunit protein mS23	-	-	-
V	mS26	-	-	-
W	Small ribosomal subunit protein mS29	structural molecule activity structural constituent of ribosome	-	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
X	BnaC06g06470D protein	RNA binding binding nucleic acid binding	-	-
Z	Mitochondrial 28S ribosomal protein S34	-	-	-
AA [auth 7]	EngC GTPase domain-containing protein	binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	-	-
BA [auth a]	Small ribosomal subunit protein mS35 mitochondrial conserved domain-containing protein	-	-	-
CA [auth b]	IMS import disulfide relay-system CHCH-CHCH-like Cx9C domain-containing protein	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
EA [auth d]	IGR domain-containing protein	-	-	-
GA [auth f]	mS47	hydrolase activity, acting on ester bonds 3-hydroxyisobutyryl-CoA hydrolase activity thiolester hydrolase activity deacylase activity short-chain fatty acyl-CoA hydrolase activity hydrolase activity fatty acyl-CoA hydrolase activity catalytic activity acyl-CoA hydrolase activity	catabolic process oxoacid metabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process branched-chain amino acid metabolic process L-valine catabolic process catabolic process oxoacid metabolic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process branched-chain amino acid catabolic process proteinogenic amino acid metabolic process proteinogenic amino acid catabolic process carboxylic acid catabolic process metabolic process cellular process small molecule metabolic process branched-chain amino acid metabolic process L-valine catabolic process small molecule catabolic process amino acid catabolic process	-
HA [auth h]	(rape) hypothetical protein	-	-	-
IA [auth i]	PROP1-like PPR domain-containing protein	-	-	-
KA [auth 2]	18S rRNA	-	-	-
F	uS7m,Small ribosomal subunit protein uS7m,Small ribosomal subunit protein uS7m	-	-	-
JA [auth k]	RRM domain-containing protein	RNA binding binding nucleic acid binding	-	-
FA [auth e]	mS45	-	developmental process multicellular organismal process reproductive system development reproductive process plant gross anatomical part developmental process developmental process involved in reproduction multicellular organism development fruit development embryo development ending in seed dormancy seed development anatomical structure development reproductive structure development post-embryonic development system development developmental process multicellular organismal process reproductive system development reproductive process plant gross anatomical part developmental process developmental process involved in reproduction multicellular organism development fruit development embryo development ending in seed dormancy seed development anatomical structure development reproductive structure development post-embryonic development system development cellular process cell communication multi-multicellular organism process pollination pollen tube development	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle
DA [auth c]	Small ribosomal subunit protein mS38	-	-	-
C	Ribosomal protein S4	RNA binding binding rRNA binding nucleic acid binding	-	-
Y	MOSC domain-containing protein	-	-	-
S	Ribosomal protein S21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
R	Small ribosomal subunit protein uS19m	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen mitochondrial small ribosomal subunit intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle organellar small ribosomal subunit ribosome mitochondrial protein-containing complex mitochondrial ribosome small ribosomal subunit intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm plastid chloroplast
N	Small ribosomal subunit protein uS15c	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure plastid organelle cytoplasm intracellular membrane-bounded organelle membraneless organelle intracellular membraneless organelle ribosome
M	Small ribosomal subunit protein uS14m	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome
L	uS13m	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	Family
A	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
A	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
A	IPR001865	Small ribosomal subunit protein uS2	Family
B	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
B	IPR001351	Small ribosomal subunit protein uS3, C-terminal	Domain
B	IPR044954	Small ribosomal subunit protein uS3m, plant	Family
B	IPR009019	K homology domain superfamily, prokaryotic type	Homologous Superfamily
D	IPR000851	Small ribosomal subunit protein uS5	Family
D	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
D	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
D	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
D	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
E	IPR000529	Small ribosomal subunit protein bS6	Family
E	IPR035980	Small ribosomal subunit protein bS6 superfamily	Homologous Superfamily
E	IPR014717	Translation elongation factor EF1B/small ribosomal subunit protein bS6	Homologous Superfamily
G	IPR000630	Small ribosomal subunit protein uS8	Family
G	IPR047863	Small ribosomal subunit protein uS8, conserved site	Conserved Site
G	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
I	IPR001848	Small ribosomal subunit protein uS10	Family
I	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
I	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
K	IPR006032	Small ribosomal subunit protein uS12	Family
K	IPR005679	Ribosomal protein uS12, bacteria	Family
K	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
O	IPR023803	Small ribosomal subunit protein bS16 domain superfamily	Homologous Superfamily
O	IPR000307	Small ribosomal subunit protein bS16	Family
Q	IPR001648	Small ribosomal subunit protein bS18	Family
Q	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
T	IPR044695	Small ribosomal subunit protein bTHXc/bTHXc, plant	Family
T	IPR030826	Small ribosomal subunit protein bTHX/bTHXc/bTHXm	Family
W	IPR019368	Small ribosomal subunit protein mS29	Family
X	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
X	IPR061811	Domain of unknown function DUF8750	Domain
X	IPR000504	RNA recognition motif domain	Domain
X	IPR034823	CID8-like protein, RNA recognition motif 1	Domain
X	IPR009818	PAM2 motif	Conserved Site
X	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
X	IPR034825	CID8-like protein, RNA recognition motif 2	Domain
AA [auth 7]	IPR004881	Ribosome biogenesis GTPase RsgA	Family
AA [auth 7]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
AA [auth 7]	IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain	Domain
AA [auth 7]	IPR010914	RsgA GTPase domain	Domain
AA [auth 7]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
CA [auth b]	IPR009069	Cysteine alpha-hairpin motif superfamily	Homologous Superfamily
CA [auth b]	IPR017264	Small ribosomal subunit protein mS37, fungal-type	Family
CA [auth b]	IPR031731	IMS import disulfide relay-system, CHCH-CHCH-like Cx9C	Domain
EA [auth d]	IPR019083	Small ribosomal subunit protein mS41, SAM domain	Domain
GA [auth f]	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
GA [auth f]	IPR032259	Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type	Family
GA [auth f]	IPR045004	Enoyl-CoA hydratase/isomerase domain	Domain
IA [auth i]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
IA [auth i]	IPR002885	Pentatricopeptide repeat	Repeat
IA [auth i]	IPR033443	PROP1-like, PPR domain	Domain
JA [auth k]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
JA [auth k]	IPR052462	SRA stem-loop-interacting RNA-binding protein/Glycine-rich RNA-binding-like	Family
JA [auth k]	IPR000504	RNA recognition motif domain	Domain
JA [auth k]	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
FA [auth e]	IPR052851	Small ribosomal subunit protein mS75	Family
C	IPR002942	RNA-binding S4 domain	Domain
C	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
C	IPR022801	Small ribosomal subunit protein uS4	Family
S	IPR001911	Small ribosomal subunit protein bS21	Family
R	IPR005732	Small ribosomal subunit protein uS19, bacteria	Family
R	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
R	IPR020934	Small ribosomal subunit protein uS19, conserved site	Conserved Site
R	IPR000504	RNA recognition motif domain	Domain
R	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
R	IPR002222	Small ribosomal subunit protein uS19	Family
R	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
R	IPR048289	NsCP33-like, RNA recognition motif 2	Domain
N	IPR005290	Small ribosomal subunit protein uS15, bacteria	Family
N	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
N	IPR000589	Small ribosomal subunit protein uS15	Family
M	IPR001209	Small ribosomal subunit protein uS14	Family
M	IPR018271	Small ribosomal subunit protein uS14, conserved site	Conserved Site
L	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
L	IPR001892	Small ribosomal subunit protein uS13	Family
L	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
L	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily