9EUF | pdb_00009euf

Cryo-EM structure of Staphylococcus aureus bacteriophage phi812 baseplate in the pre-contraction state - complete

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
M [auth B]		e9eufB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F:	ECOD (v295.2)
K [auth A]		e9eufA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F:	ECOD (v295.2)
I [auth 8]	AIRS_C	e9euf81	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: AIRS_C	ECOD (v295.2)
I [auth 8]		e9euf83	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F:	ECOD (v295.2)
F [auth 5]		e9euf54	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F:	ECOD (v295.2)
F [auth 5]		e9euf53	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F:	ECOD (v295.2)
RA [auth g]	WD40	e9eufg1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
QA [auth f]	WD40	e9euff1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
PA [auth e]	WD40	e9eufe1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
OA [auth d]	WD40	e9eufd1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
NA [auth c]	WD40	e9eufc1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
MA [auth b]	WD40	e9eufb01	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
JB [auth y]	WD40	e9eufy1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
IB [auth x]	WD40	e9eufx1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
HB [auth w]	WD40	e9eufw1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
GB [auth v]	WD40	e9eufv1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
FB [auth u]	WD40	e9eufu1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
EB [auth t]	WD40	e9euft1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
JA [auth Y]	WD40	e9eufY1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
IA [auth X]	WD40	e9eufX1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
FA [auth U]	WD40	e9eufU1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
EA [auth T]	WD40	e9eufT1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
BA [auth Q]	WD40	e9eufQ1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
AA [auth P]	WD40	e9eufP1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: WD40	ECOD (v295.2)
X [auth M]		e9eufM1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: Hypothetical protein YqbG-like	F:	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
S [auth H], U [auth J]	PF16075	Domain of unknown function (DUF4815) (DUF4815)	Domain of unknown function (DUF4815)	-	Family
N [auth C], O [auth D], T [auth I], V [auth K]	PF16075	Domain of unknown function (DUF4815) (DUF4815)	Domain of unknown function (DUF4815)	-	Family
CA [auth R], DA [auth S], GA [auth V], HA [auth W], KA [auth Z], CA [auth R], DA [auth S], GA [auth V], HA [auth W], KA [auth Z], LA [auth a]	PF16075	Domain of unknown function (DUF4815) (DUF4815)	Domain of unknown function (DUF4815)	-	Family
X [auth M], Y [auth N]	PF16075	Domain of unknown function (DUF4815) (DUF4815)	Domain of unknown function (DUF4815)	-	Family
W [auth L], Z [auth O]	PF16075	Domain of unknown function (DUF4815) (DUF4815)	Domain of unknown function (DUF4815)	-	Family
A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4], A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4], KB [auth z], SA [auth h], TA [auth i], UA [auth j], VA [auth k], WA [auth l], XA [auth m]	PF16075	Domain of unknown function (DUF4815) (DUF4815)	Domain of unknown function (DUF4815)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
S [auth H], U [auth J]	TmpF	-	-	-
Q [auth F], R [auth G]	Baseplate component	-	-	-
P [auth E]	Peptidase C51 domain-containing protein	-	biological process involved in interspecies interaction between organisms symbiont-mediated cytolysis of host cell disruption of cell in another organism cytolysis biological process involved in interaction with host biological process involved in symbiotic interaction cytolysis in another organism cellular process disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing	-
N [auth C], O [auth D], T [auth I], V [auth K]	Baseplate component	-	-	-
M [auth B]	GP-PDE domain-containing protein	phosphoric ester hydrolase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity hydrolase activity catalytic activity	primary metabolic process metabolic process cellular process lipid metabolic process	-
K [auth A]	NlpC/P60 domain-containing protein	-	biological process involved in interspecies interaction between organisms symbiont-mediated cytolysis of host cell disruption of cell in another organism cytolysis biological process involved in interaction with host biological process involved in symbiotic interaction cytolysis in another organism cellular process disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing	-
BB [auth q], CB [auth r], DB [auth s], I [auth 8], J [auth 9], BB [auth q], CB [auth r], DB [auth s], I [auth 8], J [auth 9], L [auth AA]	CBM-cenC domain-containing protein	hydrolase activity, acting on glycosyl bonds hydrolase activity catalytic activity	-	-
AB [auth p], F [auth 5], G [auth 6], H [auth 7], YA [auth n], AB [auth p], F [auth 5], G [auth 6], H [auth 7], YA [auth n], ZA [auth o]	Receptor binding protein	-	-	-
EB [auth t], FB [auth u], GB [auth v], HB [auth w], IB [auth x], EB [auth t], FB [auth u], GB [auth v], HB [auth w], IB [auth x], JB [auth y], MA [auth b], NA [auth c], OA [auth d], PA [auth e], QA [auth f], RA [auth g]	Baseplate protein	-	-	-
CA [auth R], DA [auth S], GA [auth V], HA [auth W], KA [auth Z], CA [auth R], DA [auth S], GA [auth V], HA [auth W], KA [auth Z], LA [auth a]	Capsid protein	-	-	-
AA [auth P], BA [auth Q], EA [auth T], FA [auth U], IA [auth X], AA [auth P], BA [auth Q], EA [auth T], FA [auth U], IA [auth X], JA [auth Y]	Major tail sheath protein	-	symbiont genome ejection through host cell envelope biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle symbiont genome ejection through host cell envelope, contractile tail mechanism biological process involved in interaction with host biological process involved in symbiotic interaction	virus tail virion component virus tail, sheath host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part
X [auth M], Y [auth N]	Putative baseplate component	-	-	-
W [auth L], Z [auth O]	Baseplate wedge subunit	-	-	-
A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4], A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4], KB [auth z], SA [auth h], TA [auth i], UA [auth j], VA [auth k], WA [auth l], XA [auth m]	DUF4815 domain-containing protein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
S [auth H], U [auth J]	IPR060691	Uncharacterised conserved protein UCP028438-like	Family
P [auth E]	IPR007921	CHAP domain	Domain
P [auth E]	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
N [auth C], O [auth D], T [auth I], V [auth K]	IPR006949	Baseplate protein J-like, barrel domain	Domain
M [auth B]	IPR030395	Glycerophosphodiester phosphodiesterase domain	Domain
M [auth B]	IPR017946	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Homologous Superfamily
K [auth A]	IPR058723	Weld-like protein, Lid domain	Domain
K [auth A]	IPR000064	Endopeptidase, NLPC/P60 domain	Domain
K [auth A]	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
BB [auth q], CB [auth r], DB [auth s], I [auth 8], J [auth 9], BB [auth q], CB [auth r], DB [auth s], I [auth 8], J [auth 9], L [auth AA]	IPR003305	Carbohydrate-binding, CenC-like	Domain
AB [auth p], F [auth 5], G [auth 6], H [auth 7], YA [auth n], AB [auth p], F [auth 5], G [auth 6], H [auth 7], YA [auth n], ZA [auth o]	IPR057110	ORF68, C-terminal	Domain
EB [auth t], FB [auth u], GB [auth v], HB [auth w], IB [auth x], EB [auth t], FB [auth u], GB [auth v], HB [auth w], IB [auth x], JB [auth y], MA [auth b], NA [auth c], OA [auth d], PA [auth e], QA [auth f], RA [auth g]	IPR058040	Baseplate wedge 3 tail fiber network component	Family
CA [auth R], DA [auth S], GA [auth V], HA [auth W], KA [auth Z], CA [auth R], DA [auth S], GA [auth V], HA [auth W], KA [auth Z], LA [auth a]	IPR058640	Phage Phi812, tail tube protein	Family
X [auth M], Y [auth N]	IPR056958	Phage tail tube initiator protein, putative	Family
W [auth L], Z [auth O]	IPR036779	LysM domain superfamily	Homologous Superfamily
W [auth L], Z [auth O]	IPR020288	Contractile injection system sheath initiator	Family
W [auth L], Z [auth O]	IPR018392	LysM domain	Domain
A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4], A [auth 0], B [auth 1], C [auth 2], D [auth 3], E [auth 4], KB [auth z], SA [auth h], TA [auth i], UA [auth j], VA [auth k], WA [auth l], XA [auth m]	IPR032096	Domain of unknown function DUF4815	Domain