Annotations: 9EJB

Human FANCJ helicase bound to a fork DNA in the open state

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13307	Helicase C-terminal domain (Helicase_C_2)	Helicase C-terminal domain	This domain is found at the C-terminus of DEAD-box helicases.	Domain
A	PF06733	DEAD_2 (DEAD_2)	DEAD_2	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	DNA (5'-D(PGPAPAPAPAPCPCPCP*T)-3')	-	-	-
A	Fanconi anemia group J protein	nucleic acid conformation isomerase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid helicase activity ATP-dependent activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA 5'-3' DNA helicase activity catalytic activity macromolecular conformation isomerase activity G-quadruplex unwinding activity iron-sulfur cluster binding binding nucleic acid conformation isomerase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid helicase activity ATP-dependent activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA 5'-3' DNA helicase activity catalytic activity macromolecular conformation isomerase activity G-quadruplex unwinding activity iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding DNA binding nucleic acid binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides cation binding metal ion binding	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress protein-DNA covalent cross-linking repair metabolic process cellular process macromolecule metabolic process DNA repair cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stress DNA damage response response to stress protein-DNA covalent cross-linking repair metabolic process cellular process macromolecule metabolic process DNA repair homologous recombination DNA recombination nucleotide-excision repair regulation of cellular process RNA metabolic process regulation of primary metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of biosynthetic process regulation of biological process biological regulation regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription regulation of metabolic process double-strand break repair sexual reproduction reproductive process meiotic cell cycle process cellular component organization meiosis I meiotic nuclear division cell cycle cellular component organization or biogenesis reciprocal homologous recombination cell cycle process meiotic cell cycle organelle fission reciprocal meiotic recombination nuclear division organelle organization meiosis I cell cycle process double-strand break repair involved in meiotic recombination DNA damage checkpoint signaling regulation of cell cycle phase transition signaling negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction cell communication negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction regulation of cell cycle regulation of cell cycle process DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling signal transduction in response to DNA damage	membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane cytoplasm membrane-bounded organelle intracellular anatomical structure nuclear membrane membrane nucleus intracellular membrane-bounded organelle endomembrane system intracellular organelle organelle envelope cellular anatomical structure organelle nuclear envelope organelle membrane cytoplasm membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen membraneless organelle replication fork intracellular membraneless organelle chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR045028	Helicase superfamily 1/2, DinG/Rad3-like	Family
A	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A	IPR014001	Helicase superfamily 1/2, ATP-binding domain	Domain
A	IPR006554	Helicase-like, DEXD box c2 type	Domain
A	IPR006555	ATP-dependent helicase, C-terminal	Domain
A	IPR010614	RAD3-like helicase, DEAD	Domain
A	IPR014013	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	Domain
A	IPR013020	ATP-dependent helicase Rad3/Chl1-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	: Q9BX63	Fanconi anemia breast cancer ovarian cancer Fanconi anemia complementation group J ovarian carcinoma breast carcinoma Sjogren syndrome hematopoietic and lymphoid system neoplasm inherited aplastic anemia large cell medulloblastoma malignant ependymoma acute myeloid leukemia Malignant neoplasm of breast aplastic anemia cancer Fanconi anemia breast cancer ovarian cancer Fanconi anemia complementation group J ovarian carcinoma breast carcinoma Sjogren syndrome hematopoietic and lymphoid system neoplasm inherited aplastic anemia large cell medulloblastoma malignant ependymoma acute myeloid leukemia Malignant neoplasm of breast aplastic anemia cancer non-small cell lung carcinoma ductal breast carcinoma in situ familial prostate carcinoma pancreatic intraductal papillary-mucinous neoplasm psoriasis glioblastoma Warsaw breakage syndrome hereditary breast carcinoma intellectual disability leukemia malignant glioma adrenal cortex carcinoma atypical teratoid rhabdoid tumor medulloblastoma congenital anemia osteosarcoma ovarian neoplasm head and neck cancer hereditary breast ovarian cancer syndrome invasive ductal breast carcinoma lung adenocarcinoma malignant mesothelioma anemia breast adenocarcinoma nasopharyngeal carcinoma neurofibromatosis type 1 esophageal atresia/tracheoesophageal fistula pancreatic intraductal papillary-mucinous carcinoma primitive neuroectodermal tumor

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9EJB | pdb_00009ejb

Human FANCJ helicase bound to a fork DNA in the open state

External Resource: Annotation

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation