9EAF | pdb_00009eaf

Carboxyspermidine decarboxylase from Clostridium leptum

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BWD40e9eafB1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: WD40ECOD (v295)
ATIP49e9eafA01 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: TIP49ECOD (v295)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00278Pyridoxal-dependent decarboxylase, C-terminal sheet domain (Orn_DAP_Arg_deC)Pyridoxal-dependent decarboxylase, C-terminal sheet domainThese pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
HIS-HIS-HIS-SER-SER-GLY-LEU-VAL---
A, B
Carboxynorspermidine decarboxylase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR029066PLP-binding barrelHomologous Superfamily
A, B
IPR022643Orn/DAP/Arg decarboxylase 2, C-terminalDomain
A, B
IPR009006Alanine racemase/group IV decarboxylase, C-terminalHomologous Superfamily
A, B
IPR005730Carboxynorspermidine decarboxylaseFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
LLP Parent Component: LYS

:  AA0119

:  N6-pyridoxal phosphate-L-lysine MOD:00128