Fab1-1 in complex with the capsid of Adeno-associated virus type 9
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | ecTbetaR2 | e9b6nA01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: ecTbetaR2 | ECOD (v294.2) |
| D [auth H] | ecTbetaR2 | e9b6nH01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: ecTbetaR2 | ECOD (v294.2) |
| E [auth L] | ecTbetaR2 | e9b6nL01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: ecTbetaR2 | ECOD (v294.2) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| D [auth H] | Heavy Chain | IGHV3 | - | capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | SAbDab (2026-05-15) |
| E [auth L] | Light Chain | IGLV4 | Lambda | capsid protein vp1 | capsid protein vp1 | capsid protein vp1 | SAbDab (2026-05-15) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Capsid protein VP1 | - | |||
| D [auth H] | Fab1-1 heavy chain | - | - | - |
| E [auth L] | Fab1-1 light chain | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013607 | Phospholipase A2-like domain | Domain | |
| IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily | |
| IPR001403 | Coat protein VP1/VP2, Parvovirus | Domain | |
| IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily |














