9B5Y | pdb_00009b5y

Cryo-EM structure of the LAPTH-bound PTH1R in complex with Gq


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth G]SCOP2B SuperfamilyTransducin (heterotrimeric G protein), gamma chain 8070798 3001771 SCOP2B (2022-06-29)
A [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091124 3000473 SCOP2B (2022-06-29)
A [auth R]SCOP2B SuperfamilyG protein-coupled receptor-like 8091124 3000473 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth G]WD40e9b5yG1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
E [auth N]WD40e9b5yN1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
D [auth B]WD40e9b5yB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
B [auth A]WD40e9b5yA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: WD40ECOD (v294.2)
A [auth R]ecTbetaR2e9b5yR01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: ecTbetaR2ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth B]PF25391G protein beta WD-40 repeat protein (WD40_Gbeta)G protein beta WD-40 repeat protein- Repeat
C [auth L]PF01279Parathyroid hormone family (Parathyroid)Parathyroid hormone family- Family
A [auth R]PF000027 transmembrane receptor (Secretin family) (7tm_2)7 transmembrane receptor (Secretin family)This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognise ...This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognised. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97 (Swiss:P48960); calcium-independent receptors for latrotoxin (such as Swiss:O94910), and brain-specific angiogenesis inhibitors (such as Swiss:O14514) amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins (e.g. Swiss:P83119). Other than the typical seven-transmembrane region, characteristic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth G]Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
E [auth N]scFv16---
D [auth B]Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
C [auth L]Long-acting parathyroid hormone analog
B [auth A]Guanine nucleotide-binding protein G(q)---
A [auth R]Parathyroid hormone/parathyroid hormone-related peptide receptor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
F [auth G]P59768
D [auth B]P62873
A [auth R]Q03431