8WLN

Cryo-EM structure of the MS ring with export apparatus and proximal rod within the motor-hook complex in the CCW state

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	PF08345	Flagellar M-ring protein C-terminal (YscJ_FliF_C)	Flagellar M-ring protein C-terminal	-	Family
BA [auth K], CA [auth L], DA [auth M], EA [auth N], FA [auth O], BA [auth K], CA [auth L], DA [auth M], EA [auth N], FA [auth O], GA [auth P]	PF02049	Flagellar hook-basal body complex protein FliE (FliE)	Flagellar hook-basal body complex protein FliE	-	Family
TB [auth A], UB [auth B], VB [auth C], WB [auth D]	PF00460	Flagella basal body rod protein (Flg_bb_rod)	Flagella basal body rod protein	-	Family
TB [auth A], UB [auth B], VB [auth C], WB [auth D]	PF06429	Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)	Flagellar basal body rod FlgEFG protein C-terminal	This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.	Domain
TB [auth A], UB [auth B], VB [auth C], WB [auth D]	PF01313	Bacterial export proteins, family 3 (Bac_export_3)	Bacterial export proteins, family 3	-	Family
XB [auth E]	PF01311	Bacterial export proteins, family 1 (Bac_export_1)	Bacterial export proteins, family 1	-	Family
AC [auth H], BC [auth I], CC [auth J], YB [auth F], ZB [auth G]	PF00813	FliP family (FliP)	FliP family	-	Family
DC [auth Q], EC [auth R], FC [auth S], GC [auth T], HC [auth U]	PF00460	Flagella basal body rod protein (Flg_bb_rod)	Flagella basal body rod protein	-	Family
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	PF00460	Flagella basal body rod protein (Flg_bb_rod)	Flagella basal body rod protein	-	Family
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	PF06429	Flagellar basal body rod FlgEFG protein C-terminal (Flg_bbr_C)	Flagellar basal body rod FlgEFG protein C-terminal	This family consists of a number of C-terminal domains of unknown function. This domain seems to be specific to flagellar basal-body rod and flagellar hook proteins in which Pfam:PF00460 is often present at the extreme N terminus.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	Flagellar M-ring protein	cytoskeletal motor activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	cell periphery plasma membrane membrane cellular anatomical entity bacterial-type flagellum basal body cell projection bacterial-type flagellum basal body, MS ring organelle bacterial-type flagellum non-membrane-bounded organelle
BA [auth K], CA [auth L], DA [auth M], EA [auth N], FA [auth O], BA [auth K], CA [auth L], DA [auth M], EA [auth N], FA [auth O], GA [auth P]	Flagellar hook-basal body complex protein FliE	cytoskeletal motor activity structural molecule activity	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection organelle cellular anatomical entity bacterial-type flagellum non-membrane-bounded organelle
TB [auth A], UB [auth B], VB [auth C], WB [auth D]	Flagellar biosynthetic protein FliQ	-	organelle assembly cell projection organization non-membrane-bounded organelle assembly bacterial-type flagellum assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly protein localization establishment of protein localization organelle assembly cell projection organization non-membrane-bounded organelle assembly bacterial-type flagellum assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport cellular macromolecule localization macromolecule localization	cell periphery plasma membrane membrane cellular anatomical entity bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum non-membrane-bounded organelle
XB [auth E]	Flagellar biosynthetic protein FliR	-	organelle assembly cell projection organization non-membrane-bounded organelle assembly bacterial-type flagellum assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly protein localization localization organelle assembly cell projection organization non-membrane-bounded organelle assembly bacterial-type flagellum assembly cellular component biogenesis cellular component organization bacterial-type flagellum organization organelle organization cellular component assembly cellular process cellular component organization or biogenesis cell projection assembly protein localization localization establishment of protein localization cellular localization protein targeting cellular macromolecule localization macromolecule localization establishment of localization	cell periphery plasma membrane membrane cellular anatomical entity bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum non-membrane-bounded organelle
AC [auth H], BC [auth I], CC [auth J], YB [auth F], ZB [auth G]	Flagellar biosynthetic protein FliP	-	cellular component organization bacterial-type flagellum organization organelle organization cell projection organization cellular process cellular component organization or biogenesis protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell cellular component organization bacterial-type flagellum organization organelle organization cell projection organization cellular process cellular component organization or biogenesis protein localization establishment of protein localization cellular localization nitrogen compound transport transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport cellular macromolecule localization macromolecule localization	cell periphery plasma membrane membrane cellular anatomical entity bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum non-membrane-bounded organelle
DC [auth Q], EC [auth R], FC [auth S], GC [auth T], HC [auth U]	Flagellar basal body rod protein FlgB	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum basal body, rod cellular anatomical entity bacterial-type flagellum non-membrane-bounded organelle
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	Flagellar basal-body rod protein FlgC	-	bacterial-type flagellum-dependent swarming motility bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility	bacterial-type flagellum basal body cell projection organelle bacterial-type flagellum basal body, rod cellular anatomical entity bacterial-type flagellum non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	IPR045851	AMP-binding enzyme, C-terminal domain superfamily	Homologous Superfamily
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	IPR006182	Flagellar M-ring , N-terminal	Domain
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	IPR013556	Flagellar M-ring C-terminal	Domain
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	IPR043427	Lipoprotein YscJ/Flagellar M-ring protein	Family
A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], A [auth 0], AA [auth AQ], AB [auth WL], B [auth 1], BB [auth WM], C [auth 2], CB [auth WN], D [auth 3], DB [auth WO], E [auth 4], EB [auth WP], F [auth 5], FB [auth WQ], G [auth 6], GB [auth WR], H [auth 7], HA [auth UI], HB [auth WS], I [auth 8], IA [auth UJ], IB [auth WT], J [auth 9], JA [auth UK], JB [auth WU], K [auth AA], KA [auth UL], KB [auth WV], L [auth AB], LA [auth UM], LB [auth WW], M [auth AC], MA [auth UN], MB [auth t], N [auth AD], NA [auth UO], NB [auth u], O [auth AE], OA [auth UP], OB [auth v], OC [auth b], P [auth AF], PA [auth WA], PB [auth w], PC [auth c], Q [auth AG], QA [auth WB], QB [auth x], QC [auth d], R [auth AH], RA [auth WC], RB [auth y], RC [auth e], S [auth AI], SA [auth WD], SB [auth z], SC [auth f], T [auth AJ], TA [auth WE], TC [auth g], U [auth AK], UA [auth WF], UC [auth h], V [auth AL], VA [auth WG], VC [auth i], W [auth AM], WA [auth WH], WC [auth j], X [auth AN], XA [auth WI], XC [auth k], Y [auth AO], YA [auth WJ], YC [auth l], Z [auth AP], ZA [auth WK]	IPR000067	Flagellar M-ring protein FliF	Family
BA [auth K], CA [auth L], DA [auth M], EA [auth N], FA [auth O], BA [auth K], CA [auth L], DA [auth M], EA [auth N], FA [auth O], GA [auth P]	IPR001624	Flagellar hook-basal body complex protein FliE	Family
TB [auth A], UB [auth B], VB [auth C], WB [auth D]	IPR006305	Flagellar biosynthesis protein FliQ	Family
TB [auth A], UB [auth B], VB [auth C], WB [auth D]	IPR002191	Bacterial export protein family 3	Family
XB [auth E]	IPR002010	Type III secretion system inner membrane R protein	Family
XB [auth E]	IPR006303	Flagellar biosynthesis protein FliR	Family
AC [auth H], BC [auth I], CC [auth J], YB [auth F], ZB [auth G]	IPR005838	Type III secretion system inner membrane P protein	Family
AC [auth H], BC [auth I], CC [auth J], YB [auth F], ZB [auth G]	IPR005837	Flagellar transport protein FliP	Family
DC [auth Q], EC [auth R], FC [auth S], GC [auth T], HC [auth U]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
DC [auth Q], EC [auth R], FC [auth S], GC [auth T], HC [auth U]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain
DC [auth Q], EC [auth R], FC [auth S], GC [auth T], HC [auth U]	IPR006300	Flagellar basal-body rod protein FlgB	Family
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	IPR019776	Flagellar basal body rod protein, conserved site	Conserved Site
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	IPR006299	Flagellar basal-body rod protein FlgC	Family
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	IPR010930	Flagellar basal-body/hook protein, C-terminal domain	Domain
IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], IC [auth V], JC [auth W], KC [auth X], LC [auth Y], MC [auth Z], NC [auth a]	IPR001444	Flagellar basal body rod protein, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.