8U82

KCTD5/Cullin3/Gbeta1gamma2 Complex: State B From Composite RELION Multi-body Refinement Map


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth C2]SCOP2B SuperfamilyCullin repeat-like 8084778 3000059 SCOP2B (2021-05-27)
H [auth C3]SCOP2B SuperfamilyCullin repeat-like 8084778 3000059 SCOP2B (2021-05-27)
I [auth C4]SCOP2B SuperfamilyCullin repeat-like 8084778 3000059 SCOP2B (2021-05-27)
J [auth C5]SCOP2B SuperfamilyCullin repeat-like 8084778 3000059 SCOP2B (2021-05-27)
F [auth C1]SCOP2B SuperfamilyCullin repeat-like 8084778 3000059 SCOP2B (2021-05-27)
K [auth G1]SCOP2B SuperfamilyTransducin (heterotrimeric G protein) gamma chain 8070798 3001771 SCOP2B (2021-05-27)
L [auth G2]SCOP2B SuperfamilyTransducin (heterotrimeric G protein) gamma chain 8070798 3001771 SCOP2B (2021-05-27)
M [auth G3]SCOP2B SuperfamilyTransducin (heterotrimeric G protein) gamma chain 8070798 3001771 SCOP2B (2021-05-27)
N [auth G4]SCOP2B SuperfamilyTransducin (heterotrimeric G protein) gamma chain 8070798 3001771 SCOP2B (2021-05-27)
O [auth G5]SCOP2B SuperfamilyTransducin (heterotrimeric G protein) gamma chain 8070798 3001771 SCOP2B (2021-05-27)
P [auth K1]SCOP2B SuperfamilyPOZ domain 8067485 3000894 SCOP2B (2021-05-27)
Q [auth K2]SCOP2B SuperfamilyPOZ domain 8067485 3000894 SCOP2B (2021-05-27)
R [auth K3]SCOP2B SuperfamilyPOZ domain 8067485 3000894 SCOP2B (2021-05-27)
S [auth K4]SCOP2B SuperfamilyPOZ domain 8067485 3000894 SCOP2B (2021-05-27)
T [auth K5]SCOP2B SuperfamilyPOZ domain 8067485 3000894 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
G [auth C2]PF00888e8u82C21 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF00888ECOD (1.6)
H [auth C3]PF00888e8u82C31 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF00888ECOD (1.6)
I [auth C4]PF00888e8u82C41 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF00888ECOD (1.6)
J [auth C5]PF00888e8u82C51 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF00888ECOD (1.6)
F [auth C1]PF00888e8u82C11 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF00888ECOD (1.6)
K [auth G1]PF00631e8u82G11 A: extended segmentsX: Transducin (heterotrimeric G protein), gamma chain (From Topology)H: Transducin (heterotrimeric G protein), gamma chain (From Topology)T: Transducin (heterotrimeric G protein), gamma chainF: PF00631ECOD (1.6)
L [auth G2]PF00631e8u82G21 A: extended segmentsX: Transducin (heterotrimeric G protein), gamma chain (From Topology)H: Transducin (heterotrimeric G protein), gamma chain (From Topology)T: Transducin (heterotrimeric G protein), gamma chainF: PF00631ECOD (1.6)
M [auth G3]PF00631e8u82G31 A: extended segmentsX: Transducin (heterotrimeric G protein), gamma chain (From Topology)H: Transducin (heterotrimeric G protein), gamma chain (From Topology)T: Transducin (heterotrimeric G protein), gamma chainF: PF00631ECOD (1.6)
N [auth G4]PF00631e8u82G41 A: extended segmentsX: Transducin (heterotrimeric G protein), gamma chain (From Topology)H: Transducin (heterotrimeric G protein), gamma chain (From Topology)T: Transducin (heterotrimeric G protein), gamma chainF: PF00631ECOD (1.6)
O [auth G5]PF00631e8u82G51 A: extended segmentsX: Transducin (heterotrimeric G protein), gamma chain (From Topology)H: Transducin (heterotrimeric G protein), gamma chain (From Topology)T: Transducin (heterotrimeric G protein), gamma chainF: PF00631ECOD (1.6)
P [auth K1]PF02214e8u82K11 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF02214ECOD (1.6)
Q [auth K2]PF02214e8u82K21 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF02214ECOD (1.6)
R [auth K3]PF02214e8u82K31 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF02214ECOD (1.6)
S [auth K4]PF02214e8u82K41 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF02214ECOD (1.6)
T [auth K5]PF02214e8u82K51 A: a+b two layersX: POZ domain (From Topology)H: POZ domain (From Topology)T: POZ domainF: PF02214ECOD (1.6)
A [auth B1]PF00400e8u82B11 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
B [auth B2]PF00400e8u82B21 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
C [auth B3]PF00400e8u82B31 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
D [auth B4]PF00400e8u82B41 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
E [auth B5]PF00400e8u82B51 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
PF00888Cullin family (Cullin)Cullin family- Repeat
K [auth G1],
L [auth G2],
M [auth G3],
N [auth G4],
O [auth G5]
PF00631GGL domain (G-gamma)GGL domainG-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins [1]. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA [2] ...G-protein gamma like domains (GGL) are found in the gamma subunit of the heterotrimeric G protein complex and in regulators of G protein signaling (RGS) proteins [1]. It is also found fused to an inactive Galpha in the Dictyostelium protein gbqA [2]. G-gamma likely shares a common origin with the helical N-terminal unit of G-beta [2]. All organisms that posses a G-beta possess a G-gamma [2].
Domain
P [auth K1],
Q [auth K2],
R [auth K3],
S [auth K4],
T [auth K5]
PF02214BTB/POZ domain (BTB_2)BTB/POZ domainIn voltage-gated K+ channels this domain is responsible for subfamily-specific assembly of alpha-subunits into functional tetrameric channels [1]. In KCTD1 (Swiss:Q719H9) this domain functions as a transcriptional repressor [2]. It also mediates homo ...In voltage-gated K+ channels this domain is responsible for subfamily-specific assembly of alpha-subunits into functional tetrameric channels [1]. In KCTD1 (Swiss:Q719H9) this domain functions as a transcriptional repressor [2]. It also mediates homomultimerisation of KCTD1 and interaction of KCTD1 with the transcription factor AP-2-alpha [2-3].
Domain
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
Cullin-3
K [auth G1],
L [auth G2],
M [auth G3],
N [auth G4],
O [auth G5]
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2
P [auth K1],
Q [auth K2],
R [auth K3],
S [auth K4],
T [auth K5]
BTB/POZ domain-containing protein KCTD5
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR045093CullinFamily
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR019559Cullin protein, neddylation domainDomain
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR016158Cullin homology domainDomain
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR001373Cullin, N-terminalDomain
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR016157Cullin, conserved siteConserved Site
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR036317Cullin homology domain superfamilyHomologous Superfamily
F [auth C1],
G [auth C2],
H [auth C3],
I [auth C4],
J [auth C5]
IPR016159Cullin repeat-like-containing domain superfamilyHomologous Superfamily
K [auth G1],
L [auth G2],
M [auth G3],
N [auth G4],
O [auth G5]
IPR015898G-protein gamma-like domainDomain
K [auth G1],
L [auth G2],
M [auth G3],
N [auth G4],
O [auth G5]
IPR001770G-protein, gamma subunitFamily
K [auth G1],
L [auth G2],
M [auth G3],
N [auth G4],
O [auth G5]
IPR036284G-protein gamma-like domain superfamilyHomologous Superfamily
P [auth K1],
Q [auth K2],
R [auth K3],
S [auth K4],
T [auth K5]
IPR003131Potassium channel tetramerisation-type BTB domainDomain
P [auth K1],
Q [auth K2],
R [auth K3],
S [auth K4],
T [auth K5]
IPR000210BTB/POZ domainDomain
P [auth K1],
Q [auth K2],
R [auth K3],
S [auth K4],
T [auth K5]
IPR011333SKP1/BTB/POZ domain superfamilyHomologous Superfamily
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR019775WD40 repeat, conserved siteConserved Site
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR016346Guanine nucleotide-binding protein, beta subunitFamily
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR001632G-protein, beta subunitDomain
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR001680WD40 repeatRepeat
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
IPR020472G-protein beta WD-40 repeatRepeat

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
K [auth G1],
L [auth G2],
M [auth G3],
N [auth G4],
O [auth G5]
PharosP59768
P [auth K1],
Q [auth K2],
R [auth K3],
S [auth K4],
T [auth K5]
PharosQ9NXV2
A [auth B1],
B [auth B2],
C [auth B3],
D [auth B4],
E [auth B5]
PharosP62873