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 8QLP | pdb_00008qlp

CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NDNA_topoisoIVe8qlpN1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
JDNA_topoisoIVe8qlpJ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
FDNA_topoisoIVe8qlpF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)
BDNA_topoisoIVe8qlpB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_topoisoIVECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D, H, L, P
DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3')---
C, G, K, O
RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')---
B, F, J, N
Short prokaryotic Argonaute---
A, E, I, M
Toll/interleukin-1 receptor domain-containing protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, E, I, M
IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
A, E, I, M
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily