8QLP | pdb_00008qlp

CryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDNA_topoisoIVe8qlpB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: DNA_topoisoIVECOD (v294.2)
JDNA_topoisoIVe8qlpJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: DNA_topoisoIVECOD (v294.2)
NDNA_topoisoIVe8qlpN1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: DNA_topoisoIVECOD (v294.2)
FDNA_topoisoIVe8qlpF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: DNA_topoisoIVECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, E, I, M
Toll/interleukin-1 receptor domain-containing protein- -
B, F, J, N
Short prokaryotic Argonaute---
C, G, K, O
RNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')---
D, H, L, P
DNA (5'-D(*AP*CP*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*C)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, E, I, M
IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
A, E, I, M
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily