8KFA
Cryo-EM structure of HSV-1 gB with D48 Fab complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Viral glycoprotein ectodomain-like | 8034129 | 3001498 | SCOP2B (2021-05-27) |
F [auth B] | SCOP2B Superfamily | Viral glycoprotein ectodomain-like | 8034129 | 3001498 | SCOP2B (2021-05-27) |
I [auth C] | SCOP2B Superfamily | Viral glycoprotein ectodomain-like | 8034129 | 3001498 | SCOP2B (2021-05-27) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth H], D, G [auth E] | Heavy Chain | IGHV3 | - | envelope glycoprotein b | SAbDab (2024-07-12) |
B [auth L], E [auth F], H [auth G] | Light Chain | IGKV1 | Kappa | envelope glycoprotein b | SAbDab (2024-07-12) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], F [auth B], I [auth C] | PF00606 | Herpesvirus Glycoprotein B ectodomain (Glycoprotein_B) | Herpesvirus Glycoprotein B ectodomain | This domain corresponds to the ectodomain of glycoprotein B according to ECOD. | Domain |
C [auth A], F [auth B], I [auth C] | PF17417 | Herpesvirus Glycoprotein B PH-like domain (Glycoprot_B_PH2) | Herpesvirus Glycoprotein B PH-like domain | This domain corresponds to the second PH-like domain in herpesvirus glycoprotein B. | Domain |
C [auth A], F [auth B], I [auth C] | PF17416 | Herpesvirus Glycoprotein B (Glycoprot_B_PH1) | Herpesvirus Glycoprotein B | This domain has a PH-like fold. | Domain |