8I87

Cryo-EM structure of TIR-APAZ/Ago-gRNA-DNA complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BF_UNCLASSIFIEDe8i87B2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe8i87B1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
DF_UNCLASSIFIEDe8i87D2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
DF_UNCLASSIFIEDe8i87D1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
E [auth F]F_UNCLASSIFIEDe8i87F2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
E [auth F]F_UNCLASSIFIEDe8i87F1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
H [auth T]F_UNCLASSIFIEDe8i87T2 A: a/b three-layered sandwichesX: Middle domain in Argonaute homologs (From Topology)H: Middle domain in Argonaute homologs (From Topology)T: Middle domain in Argonaute homologsF: F_UNCLASSIFIEDECOD (1.6)
H [auth T]F_UNCLASSIFIEDe8i87T1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C,
F [auth G],
G [auth O]
PF13676TIR domain (TIR_2)TIR domainThis is a family of Toll-like receptors.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C,
F [auth G],
G [auth O]
TIR domain-containing protein- -
B,
D,
E [auth F],
H [auth T]
Piwi domain-containing protein - -
J [auth H],
K [auth I],
N [auth L],
O [auth S]
RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*A)-3')---
I [auth E],
L [auth J],
M [auth K],
P [auth U]
DNA (5'-D(P*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*A)-3')---