8I87 | pdb_00008i87

Cryo-EM structure of TIR-APAZ/Ago-gRNA-DNA complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
H [auth T]Ropporin_Ne8i87T1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ropporin_NECOD (v295)
E [auth F]Ropporin_Ne8i87F1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ropporin_NECOD (v295)
DSulfotransfer_4e8i87D1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Sulfotransfer_4ECOD (v295)
BRopporin_Ne8i87B1 A: alpha arraysX: RNase A-likeH: RNase A-likeT: RNase A-likeF: Ropporin_NECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
J [auth H],
K [auth I],
N [auth L],
O [auth S]		RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*A)-3')---
I [auth E],
L [auth J],
M [auth K],
P [auth U]		DNA (5'-D(P*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*A)-3')---
B,
D,
E [auth F],
H [auth T]		Piwi domain-containing protein - -
A,
C,
F [auth G],
G [auth O]		TIR domain-containing protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B,
D,
E [auth F],
H [auth T]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
B,
D,
E [auth F],
H [auth T]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
A,
C,
F [auth G],
G [auth O]		IPR000157Toll/interleukin-1 receptor homology (TIR) domainDomain
A,
C,
F [auth G],
G [auth O]		IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyHomologous Superfamily