Annotations: 8EGW

Complex of Fat4(EC1-4) bound to Dchs1(EC1-3)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Cadherin	e8egwB1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Cadherin	ECOD (v294.2)
B	GTP_EFTU_D2	e8egwB4	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: GTP_EFTU_D2	ECOD (v294.2)
A	Cadherin	e8egwA1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: Cadherin	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00028	Cadherin domain (Cadherin)	Cadherin domain		Domain
A	PF00028	Cadherin domain (Cadherin)	Cadherin domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Protocadherin Fat 4	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	developmental process neurogenesis multicellular organism development multicellular organismal process cellular developmental process cell differentiation anatomical structure development cellular process nervous system development system development epithelium development tissue development epithelial cell differentiation heterophilic cell-cell adhesion developmental process neurogenesis multicellular organism development multicellular organismal process cellular developmental process cell differentiation anatomical structure development cellular process nervous system development system development epithelium development tissue development epithelial cell differentiation heterophilic cell-cell adhesion cell adhesion cell-cell adhesion cell-cell adhesion mediated by cadherin axonogenesis cell projection organization plasma membrane bounded cell projection morphogenesis cell development neuron projection development cell morphogenesis cellular component organization cell projection morphogenesis neuron differentiation neuron projection morphogenesis cellular component organization or biogenesis plasma membrane bounded cell projection organization axon development cell morphogenesis involved in neuron differentiation generation of neurons anatomical structure morphogenesis neuron development head development forebrain development animal organ development brain development pallium development cerebral cortex development central nervous system development telencephalon development homophilic cell-cell adhesion hippo signaling cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation intracellular signal transduction cell communication signal transduction	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle cell periphery plasma membrane membrane cell-cell junction adherens junction extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle cell periphery plasma membrane membrane cell-cell junction adherens junction anchoring junction cell junction
A	Protocadherin-16	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding cell adhesion molecule binding cadherin binding protein binding beta-catenin binding	developmental process ear development sensory organ development inner ear development cochlea development animal organ development anatomical structure development condensed mesenchymal cell proliferation cell population proliferation mesenchymal cell proliferation cellular process multicellular organism development multicellular organismal process pattern specification process developmental process ear development sensory organ development inner ear development cochlea development animal organ development anatomical structure development condensed mesenchymal cell proliferation cell population proliferation mesenchymal cell proliferation cellular process multicellular organism development multicellular organismal process pattern specification process neurogenesis cellular developmental process cell differentiation nervous system development system development digestive system development tube development digestive tract development localization protein localization to cell periphery cellular localization protein localization to plasma membrane macromolecule localization intracellular protein localization localization within membrane protein localization to membrane heart development atrioventricular valve development heart valve development mitral valve morphogenesis circulatory system development anatomical structure morphogenesis atrioventricular valve formation heart valve morphogenesis anatomical structure formation involved in morphogenesis mitral valve development mitral valve formation heart valve formation atrioventricular valve morphogenesis heterophilic cell-cell adhesion cell adhesion cell-cell adhesion cell migration cell motility post-anal tail morphogenesis biosynthetic process metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process cellular component organization organelle organization septin cytoskeleton organization cellular component organization or biogenesis cytoskeleton organization bone maturation developmental maturation skeletal system development ossification anatomical structure maturation ossification involved in bone maturation animal organ maturation bone development endocardial cushion morphogenesis heart morphogenesis mesenchyme development endocardial cushion development animal organ morphogenesis mesenchyme morphogenesis cell migration involved in heart development tissue development cell migration involved in endocardial cushion formation endocardial cushion formation tissue morphogenesis homophilic cell-cell adhesion epithelium development neural tube development chordate embryonic development embryo development embryo development ending in birth or egg hatching mesonephric epithelium development kidney epithelium development nephron morphogenesis branching morphogenesis of an epithelial tube nephron tubule morphogenesis nephron epithelium morphogenesis nephron tubule development renal system development ureteric bud morphogenesis tube morphogenesis branching involved in ureteric bud morphogenesis renal tubule development epithelial tube morphogenesis nephron development nephron epithelium development ureteric bud development mesonephros development morphogenesis of an epithelium kidney morphogenesis morphogenesis of a branching structure mesonephric tubule morphogenesis kidney development mesonephric tubule development renal tubule morphogenesis morphogenesis of a branching epithelium calcium-dependent cell-cell adhesion hippo signaling cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation intracellular signal transduction cell communication signal transduction	cellular anatomical structure membrane apical part of cell cell periphery protein-containing complex extrinsic component of plasma membrane catenin complex plasma membrane protein complex plasma membrane membrane protein complex extrinsic component of membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR049883	NOTCH1, EGF-like calcium-binding domain	Domain
B	IPR018097	EGF-like calcium-binding, conserved site	Conserved Site
B	IPR015919	Cadherin-like superfamily	Homologous Superfamily
B	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
B	IPR013032	EGF-like, conserved site	Conserved Site
B	IPR000742	EGF-like domain	Domain
B	IPR001791	Laminin G domain	Domain
B	IPR039808	Cadherin	Family
B	IPR020894	Cadherin conserved site	Conserved Site
B	IPR009030	Growth factor receptor cysteine-rich domain superfamily	Homologous Superfamily
B	IPR001881	EGF-like calcium-binding domain	Domain
B	IPR000152	EGF-type aspartate/asparagine hydroxylation site	PTM
B	IPR002126	Cadherin-like	Domain
A	IPR015919	Cadherin-like superfamily	Homologous Superfamily
A	IPR020894	Cadherin conserved site	Conserved Site
A	IPR050971	Cadherin domain-containing protein	Family
A	IPR002126	Cadherin-like	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q6V0I7	Hennekam syndrome melanoma esophageal squamous cell carcinoma van Maldergem syndrome 2 Hennekam lymphangiectasia-lymphedema syndrome 2 van Maldergem syndrome adenocarcinoma granular cell carcinoma tubular adenocarcinoma cystic kidney disease intellectual disability periventricular heterotopia with microcephaly, autosomal recessive lung carcinoma malignant ependymoma ovarian cancer Hennekam syndrome melanoma esophageal squamous cell carcinoma van Maldergem syndrome 2 Hennekam lymphangiectasia-lymphedema syndrome 2 van Maldergem syndrome adenocarcinoma granular cell carcinoma tubular adenocarcinoma cystic kidney disease intellectual disability periventricular heterotopia with microcephaly, autosomal recessive lung carcinoma malignant ependymoma ovarian cancer primitive neuroectodermal tumor van Maldergem syndrome 1 atypical teratoid rhabdoid tumor cutaneous melanoma hereditary diffuse gastric adenocarcinoma lung adenocarcinoma lymphatic system disease Malignant neoplasm of stomach non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma cribriform carcinoma gastric cancer lung cancer malignant colon neoplasm medulloblastoma osteosarcoma cribriform carcinoma of breast gastric neoplasm invasive ductal breast carcinoma
A	: Q96JQ0	mitral valve prolapse, myxomatous 2 van Maldergem syndrome van Maldergem syndrome 1 intellectual disability periventricular heterotopia with microcephaly, autosomal recessive atypical teratoid rhabdoid tumor glioblastoma lung cancer medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor colorectal cancer malignant glioma pancreatic intraductal papillary-mucinous carcinoma mitral valve prolapse, myxomatous 2 van Maldergem syndrome van Maldergem syndrome 1 intellectual disability periventricular heterotopia with microcephaly, autosomal recessive atypical teratoid rhabdoid tumor glioblastoma lung cancer medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor colorectal cancer malignant glioma pancreatic intraductal papillary-mucinous carcinoma psoriasis Van Maldergem Wetzburger Verloes syndrome familial mitral valve prolapse invasive ductal breast carcinoma malignant mesothelioma MVP1 pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.