8DE6
Oligomeric C9 in complex with aE11 Fab
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | EGF/Laminin-like | 8052125 | 3000412 | SCOP2B (2021-05-27) |
C [auth A] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052127 | 3000814 | SCOP2B (2021-05-27) |
C [auth A] | SCOP2B Superfamily | LDL receptor-like module | 8052141 | 3000728 | SCOP2B (2021-05-27) |
F [auth C] | SCOP2B Superfamily | LDL receptor-like module | 8052141 | 3000728 | SCOP2B (2021-05-27) |
F [auth C] | SCOP2B Superfamily | EGF/Laminin-like | 8052125 | 3000412 | SCOP2B (2021-05-27) |
F [auth C] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052127 | 3000814 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052127 | 3000814 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | EGF/Laminin-like | 8052125 | 3000412 | SCOP2B (2021-05-27) |
G | SCOP2B Superfamily | LDL receptor-like module | 8052141 | 3000728 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PF07686 | e8de6E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth B] | PF07686 | e8de6B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
B [auth F] | PF07686 | e8de6F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
E [auth I] | PF07686 | e8de6I1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C [auth A] | PF01823 | e8de6A1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
C [auth A] | F_UNCLASSIFIED | e8de6A4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth A] | PF00057 | e8de6A3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: PF00057 | ECOD (1.6) |
C [auth A] | PF00090 | e8de6A2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: PF00090 | ECOD (1.6) |
F [auth C] | PF01823 | e8de6C1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
F [auth C] | F_UNCLASSIFIED | e8de6C4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth C] | PF00057 | e8de6C3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: PF00057 | ECOD (1.6) |
F [auth C] | PF00090 | e8de6C2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: PF00090 | ECOD (1.6) |
G | PF01823 | e8de6G1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
G | F_UNCLASSIFIED | e8de6G4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
G | PF00057 | e8de6G3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: PF00057 | ECOD (1.6) |
G | PF00090 | e8de6G2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: PF00090 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A [auth E], D [auth B] | Heavy Chain | IGHV2 | - | complement component c9 | complement component c9, complement component c9 | SAbDab (2024-06-21) |
B [auth F], E [auth I] | Light Chain | IGKV10 | Kappa | complement component c9 | complement component c9, complement component c9 | SAbDab (2024-06-21) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], F [auth C], G | PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain |
C [auth A], F [auth C], G | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |