8BX7
Structure of the rod CNG channel bound to calmodulin
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | CLZ domain-like | 8091636 | 3002529 | SCOP2B (2021-05-27) |
D [auth C] | SCOP2B Superfamily | CLZ domain-like | 8091636 | 3002529 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
A [auth D] | PF00027 | Cyclic nucleotide-binding domain (cNMP_binding) | Cyclic nucleotide-binding domain | This domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
B [auth A], C [auth B], D [auth C] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
B [auth A], C [auth B], D [auth C] | PF16526 | C-terminal leucine zipper domain of cyclic nucleotide-gated channels (CLZ) | C-terminal leucine zipper domain of cyclic nucleotide-gated channels | - | Coiled-coil |
B [auth A], C [auth B], D [auth C] | PF00027 | Cyclic nucleotide-binding domain (cNMP_binding) | Cyclic nucleotide-binding domain | This domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D] | IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |
A [auth D] | IPR018488 | Cyclic nucleotide-binding, conserved site | Conserved Site |
A [auth D] | IPR005821 | Ion transport domain | Domain |
A [auth D] | IPR000595 | Cyclic nucleotide-binding domain | Domain |
A [auth D] | IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily |
B [auth A], C [auth B], D [auth C] | IPR005821 | Ion transport domain | Domain |
B [auth A], C [auth B], D [auth C] | IPR000595 | Cyclic nucleotide-binding domain | Domain |
B [auth A], C [auth B], D [auth C] | IPR032406 | Cyclic nucleotide-gated channel, C-terminal leucine zipper domain | Domain |
B [auth A], C [auth B], D [auth C] | IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |
B [auth A], C [auth B], D [auth C] | IPR018488 | Cyclic nucleotide-binding, conserved site | Conserved Site |
B [auth A], C [auth B], D [auth C] | IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Cyclic nucleotide-gated ion channel |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |