8BMW | pdb_00008bmw

SsoCsm

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
M [auth I]SLBBe8bmwI1 A: beta barrelsX: RNase A-likeH: RNase A-likeT: RNase A-likeF: SLBBECOD (v294.2)
L [auth H]PAEe8bmwH1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PAEECOD (v294.2)
K [auth F]PAEe8bmwF1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PAEECOD (v294.2)
J [auth G]PAEe8bmwG1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PAEECOD (v294.2)
H [auth N]e8bmwN01 A: beta barrelsX: Fe-binding domain in prismane-like proteinsH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF:ECOD (v294.2)
G [auth L]PAEe8bmwL1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PAEECOD (v294.2)
F [auth J]PAEe8bmwJ1 A: beta barrelsX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: PAEECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
O [auth M]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
N [auth K]PF22335Cas10/Cmr2, second palm domain (Cas10-Cmr2_palm2)Cas10/Cmr2, second palm domainThis entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5]. ...This entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5].
Domain
N [auth K]PF01966HD domain (HD)HD domain- Family
L [auth H],
M [auth I]		PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
J [auth G],
K [auth F]		PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
H [auth N]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
G [auth L]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
F [auth J]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
O [auth M]CRISPR-associated protein Cas5 (Type III-D)- -
N [auth K]CRISPR-associated protein Cas10 (Type III-D) -
L [auth H],
M [auth I]		CRISPR-associated Cas7 paralog (Type III-D)- -
J [auth G],
K [auth F]		CRISPR-associated Cas7 paralog (Type III-D)- -
I [auth R]RNA (48-MER)---
H [auth N]CRISPR-associated Cas7 paralog (Type III-D)- -
G [auth L]CRISPR-associated Cas7 paralog (Type III-D)- -
F [auth J]CRISPR-associated Cas7 paralog (Type III-D)- -
A, B, C, D, E
CRISPR-associated small subunit protein (Type III-D)- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O [auth M]IPR005537CRISPR type III-associated proteinDomain
N [auth K]IPR054767Cas10/Cmr2, second palm domainDomain
N [auth K]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
N [auth K]IPR052117CRISPR-associated Cas10/Csm1 subtype III-A proteinFamily
N [auth K]IPR006674HD domainDomain
L [auth H],
M [auth I]		IPR052216CRISPR-associated Csm3 endoribonucleaseFamily
L [auth H],
M [auth I]		IPR005537CRISPR type III-associated proteinDomain
L [auth H],
M [auth I]		IPR013411CRISPR-associated RAMP protein Csx7Family
J [auth G],
K [auth F]		IPR052216CRISPR-associated Csm3 endoribonucleaseFamily
J [auth G],
K [auth F]		IPR005537CRISPR type III-associated proteinDomain
J [auth G],
K [auth F]		IPR013411CRISPR-associated RAMP protein Csx7Family
H [auth N]IPR052216CRISPR-associated Csm3 endoribonucleaseFamily
H [auth N]IPR005537CRISPR type III-associated proteinDomain
G [auth L]IPR005537CRISPR type III-associated proteinDomain
G [auth L]IPR017005Uncharacterised conserved protein UCP032748Family
F [auth J]IPR005537CRISPR type III-associated proteinDomain