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 8BMW | pdb_00008bmw

SsoCsm

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
M [auth I]SLBBe8bmwI1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: SLBBECOD (v295.2)
L [auth H]Methyltransf_4e8bmwH1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Methyltransf_4ECOD (v295.2)
K [auth F]Methyltransf_4e8bmwF1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Methyltransf_4ECOD (v295.2)
J [auth G]Methyltransf_4e8bmwG1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Methyltransf_4ECOD (v295.2)
H [auth N]TPR_16e8bmwN01 A: alpha arraysX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: TPR_16ECOD (v295.2)
G [auth L]Methyltransf_4e8bmwL1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Methyltransf_4ECOD (v295.2)
F [auth J]Methyltransf_4e8bmwJ1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrelF: Methyltransf_4ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
O [auth M]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
N [auth K]PF22335Cas10/Cmr2, second palm domain (Cas10-Cmr2_palm2)Cas10/Cmr2, second palm domainThis entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5]. ...This entry represents the second palm domain of Cas10 subunit (named Csm1 in Type III-A and Cmr2 in III-B systems) from type III CRISPR-Cas systems [6]. This domain contains a conserved GGDD motif that is important for DNA polymerase activity [1-5].
Domain
N [auth K]PF01966HD domain (HD)HD domain- Family
L [auth H],
M [auth I]		PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
J [auth G],
K [auth F]		PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
H [auth N]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
G [auth L]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family
F [auth J]PF03787RAMP superfamily (RAMPs)RAMP superfamily- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O [auth M]IPR005537CRISPR type III-associated proteinDomain
N [auth K]IPR054767Cas10/Cmr2, second palm domainDomain
N [auth K]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
N [auth K]IPR052117CRISPR-associated Cas10/Csm1 subtype III-A proteinFamily
N [auth K]IPR006674HD domainDomain
L [auth H],
M [auth I]		IPR052216CRISPR_Csm3_endoribonucleaseUnknown
L [auth H],
M [auth I]		IPR005537CRISPR type III-associated proteinDomain
L [auth H],
M [auth I]		IPR013411CRISPR-associated RAMP protein Csx7Family
J [auth G],
K [auth F]		IPR052216CRISPR_Csm3_endoribonucleaseUnknown
J [auth G],
K [auth F]		IPR005537CRISPR type III-associated proteinDomain
J [auth G],
K [auth F]		IPR013411CRISPR-associated RAMP protein Csx7Family
H [auth N]IPR052216CRISPR_Csm3_endoribonucleaseUnknown
H [auth N]IPR005537CRISPR type III-associated proteinDomain
G [auth L]IPR005537CRISPR type III-associated proteinDomain
G [auth L]IPR017005Uncharacterised conserved protein UCP032748Family
F [auth J]IPR005537CRISPR type III-associated proteinDomain