8B0G
2C9, C5b9-CD59 structure
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth D] | SCOP2B Superfamily | LDL receptor-like module | 8052139 | 3000728 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | EGF/Laminin-like | 8052131 | 3000412 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | MAC/CDC-like | 8052046 | 3002081 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052149 | 3000814 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052150 | 3000814 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052147 | 3000814 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | LDL receptor-like module | 8052137 | 3000728 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | MAC/CDC-like | 8052045 | 3002081 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | EGF/Laminin-like | 8052128 | 3000412 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052148 | 3000814 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Lipocalins | 8041276 | 3001332 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | LDL receptor-like module | 8052141 | 3000728 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | EGF/Laminin-like | 8052125 | 3000412 | SCOP2B (2022-06-29) |
F [auth H] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052127 | 3000814 | SCOP2B (2022-06-29) |
H [auth J] | SCOP2B Superfamily | EGF/Laminin-like | 8052125 | 3000412 | SCOP2B (2022-06-29) |
H [auth J] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052127 | 3000814 | SCOP2B (2022-06-29) |
H [auth J] | SCOP2B Superfamily | LDL receptor-like module | 8052141 | 3000728 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | LDL receptor-like module | 8052141 | 3000728 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052127 | 3000814 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | EGF/Laminin-like | 8052125 | 3000412 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | MAC/CDC-like | 8052040 | 3002081 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052119 | 3000814 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052120 | 3000814 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | LDL receptor-like module | 8052133 | 3000728 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8052111 | 3000902 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8052110 | 3000902 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | TSP-1 type 1 repeat | 8052121 | 3000814 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | EGF/Laminin-like | 8052123 | 3000412 | SCOP2B (2022-06-29) |
J [auth G] | SCOP2B Superfamily | Snake toxin-like | 8034633 | 3000545 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | MACPF | e8b0gC4 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
B [auth C] | hEGF_like | e8b0gC1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_like | ECOD (1.6) |
B [auth C] | Sushi | e8b0gC2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
B [auth C] | Sushi_1 | e8b0gC6 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_1 | ECOD (1.6) |
B [auth C] | Ldl_recept_a | e8b0gC5 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
B [auth C] | TSP_1_1 | e8b0gC3 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
B [auth C] | TSP_1 | e8b0gC7 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1 | ECOD (1.6) |
C [auth D] | MACPF | e8b0gD5 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
C [auth D] | hEGF_like | e8b0gD1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_like | ECOD (1.6) |
C [auth D] | Ldl_recept_a | e8b0gD4 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
C [auth D] | TSP_1_1 | e8b0gD3 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
C [auth D] | TSP_1 | e8b0gD2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1 | ECOD (1.6) |
D [auth E] | MACPF | e8b0gE3 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
D [auth E] | hEGF_like | e8b0gE2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_like | ECOD (1.6) |
D [auth E] | Ldl_recept_a | e8b0gE4 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
D [auth E] | TSP_1_1 | e8b0gE5 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
E [auth F] | Lipocalin | e8b0gF1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: Lipocalin | ECOD (1.6) |
F [auth H] | MACPF | e8b0gH1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
F [auth H] | hEGF_4 | e8b0gH4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
F [auth H] | Ldl_recept_a | e8b0gH3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
F [auth H] | TSP_1_1 | e8b0gH2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
H [auth J] | MACPF | e8b0gJ1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
H [auth J] | hEGF_4 | e8b0gJ4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
H [auth J] | Ldl_recept_a | e8b0gJ3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
H [auth J] | TSP_1_1 | e8b0gJ2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
I | MACPF | e8b0gI1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
I | hEGF_4 | e8b0gI4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_4 | ECOD (1.6) |
I | Ldl_recept_a | e8b0gI3 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
I | TSP_1_1 | e8b0gI2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
G [auth B] | MACPF | e8b0gB7 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: MACPF | ECOD (1.6) |
G [auth B] | hEGF_like | e8b0gB4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF_like | ECOD (1.6) |
G [auth B] | Sushi | e8b0gB3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
G [auth B] | Ldl_recept_a | e8b0gB6 | A: few secondary structure elements | X: EGF-like | H: LDL receptor-like module (From Topology) | T: LDL receptor-like module | F: Ldl_recept_a | ECOD (1.6) |
G [auth B] | TSP_1_1 | e8b0gB2 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1_1 | ECOD (1.6) |
G [auth B] | TSP_1 | e8b0gB8 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1 | ECOD (1.6) |
J [auth G] | UPAR_LY6 | e8b0gG1 | A: few secondary structure elements | X: Snake toxin-like (From Topology) | H: Snake toxin-like (From Topology) | T: Snake toxin-like | F: UPAR_LY6 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17790 | Macroglobulin domain MG1 (MG1) | Macroglobulin domain MG1 | This entry represents the N-terminal macroglobulin domain found in complement proteins C3, C4 and C5. | Domain | |
PF17791 | Macroglobulin domain MG3 (MG3) | Macroglobulin domain MG3 | This entry corresponds to the MG3 domain found in complement components C3, C4 and C5. | Domain | |
PF01835 | MG2 domain (MG2) | MG2 domain | This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin in eukaryotes [1]. Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. How ... | Domain | |
PF00207 | Alpha-2-macroglobulin family (A2M) | Alpha-2-macroglobulin family | - | Family | |
PF07678 | A-macroglobulin TED domain (TED_complement) | A-macroglobulin TED domain | - | Repeat | |
PF21309 | Complement component 5, CUB domain (C5_CUB) | Complement component 5, CUB domain | Complement component 5 (C5) is a component of the lytic complex consisting of factors C5-C9 which attack bacterial cell membranes. This entry represents the CUB domain [1-5]. | Domain | |
PF17789 | Macroglobulin domain MG4 (MG4) | Macroglobulin domain MG4 | This domain is MG4 found in complement C3 and C5 proteins. | Domain | |
PF07703 | Alpha-2-macroglobulin bait region domain (A2M_BRD) | Alpha-2-macroglobulin bait region domain | Alpha-2-macroglobulins (A2Ms) are plasma proteins that trap and inhibit a broad range of proteases and are major components of the eukaryotic innate immune system. However, A2M-like proteins were identified in pathogenically invasive bacteria and spe ... | Domain | |
B [auth C] | PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain |
B [auth C] | PF01823 | MAC/Perforin domain (MACPF) | MAC/Perforin domain | The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ... | Domain |
B [auth C] | PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain |
B [auth C] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
C [auth D] | PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain |
C [auth D] | PF01823 | MAC/Perforin domain (MACPF) | MAC/Perforin domain | The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ... | Domain |
C [auth D] | PF21195 | Complement components C8A/B/C6, EGF-like domain (C8A_B_C6_EGF-like) | Complement components C8A/B/C6, EGF-like domain | This domain is found in the alpha and beta chains of Complement component C8 (C8A/B), in Complement components C6 (C6) from humans, constituents of the membrane attack complex (MAC) that play a key role in the innate and adaptive immune response by f ... | Domain |
C [auth D] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
D [auth E] | PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain |
D [auth E] | PF21195 | Complement components C8A/B/C6, EGF-like domain (C8A_B_C6_EGF-like) | Complement components C8A/B/C6, EGF-like domain | This domain is found in the alpha and beta chains of Complement component C8 (C8A/B), in Complement components C6 (C6) from humans, constituents of the membrane attack complex (MAC) that play a key role in the innate and adaptive immune response by f ... | Domain |
D [auth E] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
E [auth F] | PF00061 | Lipocalin / cytosolic fatty-acid binding protein family (Lipocalin) | Lipocalin / cytosolic fatty-acid binding protein family | Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The family also encompasses the enzyme prostaglandin D synthase (EC:5.3.99.2). Alignment subsumes both the lipocalin and fatty acid ... | Domain |
F [auth H], H [auth J], I | PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain |
F [auth H], H [auth J], I | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
G [auth B] | PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain |
G [auth B] | PF01823 | MAC/Perforin domain (MACPF) | MAC/Perforin domain | The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ... | Domain |
G [auth B] | PF21195 | Complement components C8A/B/C6, EGF-like domain (C8A_B_C6_EGF-like) | Complement components C8A/B/C6, EGF-like domain | This domain is found in the alpha and beta chains of Complement component C8 (C8A/B), in Complement components C6 (C6) from humans, constituents of the membrane attack complex (MAC) that play a key role in the innate and adaptive immune response by f ... | Domain |
G [auth B] | PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain |
G [auth B] | PF00057 | Low-density lipoprotein receptor domain class A (Ldl_recept_a) | Low-density lipoprotein receptor domain class A | - | Repeat |
J [auth G] | PF00021 | u-PAR/Ly-6 domain (UPAR_LY6) | u-PAR/Ly-6 domain | This extracellular disulphide bond rich domain is related to Pfam:PF00087. | Domain |