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 8Z5X | pdb_00008z5x

Cryo-EM structure of the MS ring with the proximal rod and the export apparatus (C1) within the polar flagellar motor


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
KA [auth AZ]PKD_channele8z5xAZ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
LA [auth Aa]PKD_channele8z5xAa1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
NA [auth Ac]PKD_channele8z5xAc1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
MA [auth Ab]PKD_channele8z5xAb1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
JA [auth AY]PKD_channele8z5xAY1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
IA [auth AX]PKD_channele8z5xAX1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
DA [auth AS]PKD_channele8z5xAS1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
EA [auth AT]PKD_channele8z5xAT1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
FA [auth AU]PKD_channele8z5xAU1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
HA [auth AW]PKD_channele8z5xAW1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
GA [auth AV]PKD_channele8z5xAV1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
BC [auth f]PKD_channele8z5xf1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
CB [auth G]PKD_channele8z5xG1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
CC [auth g]PKD_channele8z5xg1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
EB [auth I]PKD_channele8z5xI1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
F [auth 5]PKD_channele8z5x51 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
GB [auth K]PKD_channele8z5xK1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
HB [auth L]PKD_channele8z5xL1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
K [auth A]PKD_channele8z5xA1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
LB [auth P]PKD_channele8z5xP1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
MC [auth q]PKD_channele8z5xq1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
NC [auth r]PKD_channele8z5xr1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
RB [auth V]PKD_channele8z5xV1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
RC [auth v]PKD_channele8z5xv1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
SC [auth w]PKD_channele8z5xw1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
TB [auth X]PKD_channele8z5xX1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
UB [auth Y]PKD_channele8z5xY1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
VB [auth Z]PKD_channele8z5xZ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
VC [auth z]PKD_channele8z5xz1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
XB [auth b]PKD_channele8z5xb1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
ZA [auth D]PKD_channele8z5xD1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
ZB [auth d]PKD_channele8z5xd1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
YB [auth c]PKD_channele8z5xc1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
YA [auth C]PKD_channele8z5xC1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
XA [auth B]PKD_channele8z5xB1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
WB [auth a]PKD_channele8z5xa1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
UC [auth y]PKD_channele8z5xy1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
TC [auth x]PKD_channele8z5xx1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
SB [auth W]PKD_channele8z5xW1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
QC [auth u]PKD_channele8z5xu1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
QB [auth U]PKD_channele8z5xU1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
PC [auth t]PKD_channele8z5xt1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
PB [auth T]PKD_channele8z5xT1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
OC [auth s]PKD_channele8z5xs1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
OB [auth S]PKD_channele8z5xS1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
NB [auth R]PKD_channele8z5xR1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
MB [auth Q]PKD_channele8z5xQ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
LC [auth p]PKD_channele8z5xp1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
KC [auth o]PKD_channele8z5xo1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
KB [auth O]PKD_channele8z5xO1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
JC [auth n]Integrin_A_Ig_2e8z5xn1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: Integrin_A_Ig_2ECOD (v295.2)
JB [auth N]PKD_channele8z5xN1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
IC [auth m]PKD_channele8z5xm1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
IB [auth M]PKD_channele8z5xM1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
HC [auth l]PKD_channele8z5xl1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
GC [auth k]PKD_channele8z5xk1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
FC [auth j]PKD_channele8z5xj1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
FB [auth J]PKD_channele8z5xJ1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
EC [auth i]PKD_channele8z5xi1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
E [auth 4]PKD_channele8z5x41 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
DC [auth h]PKD_channele8z5xh1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
DB [auth H]PKD_channele8z5xH1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
D [auth 3]PKD_channele8z5x31 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
C [auth 2]PKD_channele8z5x21 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
BB [auth F]PKD_channele8z5xF1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
B [auth 1]PKD_channele8z5x11 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
AC [auth e]PKD_channele8z5xe1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)
AB [auth E]PKD_channele8z5xE1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: PKD_channelECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth 8]Flagellar biosynthetic protein FliR-
AD [auth Aq],
WC [auth Am],
XC [auth An],
YC [auth Ao],
ZC [auth Ap]
Alanine-modelled FlgB-Dc loop---
UA [auth Aj]Flagellar biosynthetic protein FlhB---
Flagellar hook-basal body complex protein FliE
Flagellar basal-body rod protein FlgC-
DA [auth AS],
EA [auth AT],
FA [auth AU],
GA [auth AV],
HA [auth AW]
Flagellar basal body rod protein FlgB-
BA [auth AQ],
CA [auth AR],
G [auth 6],
H [auth 7]
Flagellar biosynthetic protein FliQ-
Flagellar M-ring protein
FliE-helix 1---
A [auth 0],
AA [auth AP],
J [auth 9],
VA [auth Ak],
WA [auth Al]
Flagellar biosynthetic protein FliP-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth 8]IPR002010Type III secretion system inner membrane R proteinFamily
I [auth 8]IPR006303Flagellar biosynthesis protein FliRFamily
IPR001624Flagellar hook-basal body complex protein FliEFamily
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR006299Flagellar basal-body rod protein FlgCFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain
DA [auth AS],
EA [auth AT],
FA [auth AU],
GA [auth AV],
HA [auth AW]
IPR006300Flagellar basal-body rod protein FlgBFamily
BA [auth AQ],
CA [auth AR],
G [auth 6],
H [auth 7]
IPR006305Flagellar biosynthesis protein FliQFamily
BA [auth AQ],
CA [auth AR],
G [auth 6],
H [auth 7]
IPR002191Bacterial export protein family 3Family
IPR006182Flagellar M-ring, N-terminalDomain
IPR045851AMP-binding enzyme domain superfamilyHomologous Superfamily
IPR013556Flagellar M-ring C-terminalDomain
IPR043427Lipoprotein YscJ/Flagellar M-ring proteinFamily
IPR000067Flagellar M-ring protein FliFFamily
IPR063443FliF, N-terminal domainDomain
A [auth 0],
AA [auth AP],
J [auth 9],
VA [auth Ak],
WA [auth Al]
IPR005838Type III secretion system inner membrane P proteinFamily
A [auth 0],
AA [auth AP],
J [auth 9],
VA [auth Ak],
WA [auth Al]
IPR005837Flagellar transport protein FliPFamily