8YO4

structure of phage T4 topoisomerase II central domain bound with DNA

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C [auth B]	PF00521	DNA gyrase/topoisomerase IV, subunit A (DNA_topoisoIV)	DNA gyrase/topoisomerase IV, subunit A	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C [auth B]	DNA topoisomerase medium subunit	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding DNA binding nucleic acid binding ATP-dependent activity, acting on DNA isomerase activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid DNA topoisomerase activity DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity catalytic activity ATP-dependent activity	cellular component organization organelle organization nuclear chromosome segregation chromosome organization sister chromatid segregation cellular process cellular component organization or biogenesis cell cycle chromosome segregation cell cycle process primary metabolic process DNA conformation change DNA metabolic process nucleic acid metabolic process cellular component organization organelle organization nuclear chromosome segregation chromosome organization sister chromatid segregation cellular process cellular component organization or biogenesis cell cycle chromosome segregation cell cycle process primary metabolic process DNA conformation change DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process DNA topological change metabolic process macromolecule metabolic process	protein-containing complex
B [auth C], D	phage T4 topoisomerase II gp39-gp60 subunit	-	-	-
E	DNA (5'-D(PTPGPTPGPTPGPTPAPTPAPTPAPTPAPCPAPCPAPTPAPTPAPTPA)-3')	-	-	-
F	DNA (5'-D(PAPTPAPTPAPTPGPTPGPTPAPTPAPTPAPTPAPCPAPCPAPCPAPT)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B]	IPR001154	DNA topoisomerase II, eukaryotic-type	Family
A, C [auth B]	IPR013760	DNA topoisomerase, type IIA-like domain superfamily	Homologous Superfamily
A, C [auth B]	IPR050634	DNA Topoisomerase II	Family
A, C [auth B]	IPR013757	DNA topoisomerase, type IIA, alpha-helical domain superfamily	Homologous Superfamily
A, C [auth B]	IPR013758	DNA topoisomerase, type IIA, domain A, alpha-beta	Homologous Superfamily
A, C [auth B]	IPR002205	DNA topoisomerase, type IIA, domain A	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.