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 8Y80 | pdb_00008y80

Cryo-EM structure of the tetrameric SPARSA gRNA-ssDNA complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
NUCR_hingee8y80N1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: UCR_hingeECOD (v295.2)
JUCR_hingee8y80J1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: UCR_hingeECOD (v295.2)
FUCR_hingee8y80F1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: UCR_hingeECOD (v295.2)
BUCR_hingee8y80B1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: UCR_hingeECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, E, I, M
PF13289SIR2-like domain (SIR2_2)SIR2-like domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D, H, L, P
DNA (25-mer)---
C, G, K, O
RNA (21-mer)---
B, F, J, N
Piwi domain protein - -
A, E, I, M
Sir2 superfamily protein- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B, F, J, N
IPR036397Ribonuclease H superfamilyHomologous Superfamily
B, F, J, N
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
A, E, I, M
IPR029035DHS-like NAD/FAD-binding domain superfamilyHomologous Superfamily