Annotations: 8XMK

Local refinement of SRCR5-9 domains

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth D]		e8xmkD01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth D], B [auth E], C [auth F]	PF00530	Scavenger receptor cysteine-rich domain (SRCR)	Scavenger receptor cysteine-rich domain	These domains are disulphide rich extracellular domains. These domains are found in several extracellular receptors and may be involved in protein-protein interactions.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth D], B [auth E], C [auth F]	Scavenger receptor cysteine-rich type 1 protein M130	scaffold protein binding protein binding binding cargo receptor activity scavenger receptor activity	acute-phase response response to stimulus defense response response to stress inflammatory response acute inflammatory response	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle membrane intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle membrane intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle cytoplasmic vesicle vesicle membrane organelle endocytic vesicle membrane vesicle organelle membrane endocytic vesicle cell periphery plasma membrane cell surface external side of plasma membrane side of membrane extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth D], B [auth E], C [auth F]	IPR036772	SRCR-like domain superfamily	Homologous Superfamily
A [auth D], B [auth E], C [auth F]	IPR001190	SRCR domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth D], B [auth E], C [auth F]	: Q86VB7	IgA glomerulonephritis Liver Cirrhosis, Experimental carotid artery disease glioblastoma invasive ductal breast carcinoma limb-girdle muscular dystrophy lung cancer malignant ependymoma nasopharyngeal carcinoma B-cell chronic lymphocytic leukemia pancreatic intraductal papillary-mucinous carcinoma breast cancer pilocytic astrocytoma Sjogren syndrome cutaneous lupus erythematosus IgA glomerulonephritis Liver Cirrhosis, Experimental carotid artery disease glioblastoma invasive ductal breast carcinoma limb-girdle muscular dystrophy lung cancer malignant ependymoma nasopharyngeal carcinoma B-cell chronic lymphocytic leukemia pancreatic intraductal papillary-mucinous carcinoma breast cancer pilocytic astrocytoma Sjogren syndrome cutaneous lupus erythematosus type 2 diabetes mellitus Duchenne muscular dystrophy head and neck cancer juvenile dermatomyositis lung carcinoma medulloblastoma astrocytic tumor ovarian cancer Becker muscular dystrophy pancreatic intraductal papillary-mucinous neoplasm cancer pituitary cancer chronic obstructive pulmonary disease dermatomyositis ulcerative colitis hepatocellular carcinoma interstitial cystitis large cell medulloblastoma lung adenocarcinoma malignant colon neoplasm adrenal cortex carcinoma myopathy atopic eczema pancreatic ductal adenocarcinoma brain aneurysm pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia schizophrenia congestive heart failure tuberculosis diabetes mellitus

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.