The cryo-EM structure of the Mycobacterium tuberculosis CRISPR-Csm complex
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M [auth B] | WD40 | e8x5dB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| L [auth C] | WD40 | e8x5dC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| K [auth D] | WD40 | e8x5dD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| J [auth E] | WD40 | e8x5dE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| I [auth F] | Sigma70_r1_1 | e8x5dF01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Sigma70_r1_1 | ECOD (v294.2) |
| C [auth N] | Sigma70_r1_1 | e8x5dN01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Sigma70_r1_1 | ECOD (v294.2) |
| H | WD40 | e8x5dH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| G [auth I] | WD40 | e8x5dI1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| F [auth J] | WD40 | e8x5dJ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| D [auth L] | WD40 | e8x5dL1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| B [auth G] | WD40 | e8x5dG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| A [auth K] | Sigma70_r1_1 | e8x5dK01 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Sigma70_r1_1 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth N] | PF03787 | RAMP superfamily (RAMPs) | RAMP superfamily | - | Family |
| PF03787 | RAMP superfamily (RAMPs) | RAMP superfamily | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| I [auth F], J [auth E], K [auth D], L [auth C], M [auth B] | Csm2 | - | - | - |
| E [auth O] | RNA (47-MER) | - | - | - |
| C [auth N] | CRISPR system Cms protein Csm5 | |||
| CRISPR system Cms endoribonuclease Csm3 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth N] | IPR005537 | CRISPR type III-associated protein | Domain |
| C [auth N] | IPR010173 | CRISPR-associated protein Csm5 | Family |
| IPR052216 | CRISPR-associated Csm3 endoribonuclease | Family | |
| IPR013412 | CRISPR-associated RAMP Csm3 | Family | |
| IPR005537 | CRISPR type III-associated protein | Domain |














