8WQH
cryo-EM structure of neddylated CUL2-RBX1-ELOB-ELOC-FEM1B bound with the C-degron of CCDC89 (conformation 2)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth J] | SCOP2B Superfamily | RING/U-box like | 8040866 | 3000160 | SCOP2B (2021-05-27) |
D [auth B] | SCOP2B Superfamily | RING/U-box like | 8040866 | 3000160 | SCOP2B (2021-05-27) |
F | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2021-05-27) |
I [auth K] | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2021-05-27) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], C [auth A] | PF00888 | Cullin family (Cullin) | Cullin family | - | Repeat |
B [auth J], D [auth B] | PF12678 | RING-H2 zinc finger domain (zf-rbx1) | RING-H2 zinc finger domain | There are 8 cysteine/ histidine residues which are proposed to be the conserved residues involved in zinc binding. The protein, of which this domain is the conserved region, participates in diverse functions relevant to chromosome metabolism and cell ... | Domain |
E, H [auth I] | PF03931 | Skp1 family, tetramerisation domain (Skp1_POZ) | Skp1 family, tetramerisation domain | - | Domain |
F, I [auth K] | PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
G [auth D], K [auth H] | PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat |