8WD8
Cryo-EM structure of TtdAgo-guide DNA-target DNA complex
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth B] | PF22476 | Argonaute, N-terminal domain (Ago_N_3) | Argonaute, N-terminal domain | This domain is found at the N-terminal end of Protein argonaute from Pyrococcus furiosus (Ago), a component of the RNAi effector complex (RISC). Ago is organised into four domains: N (this entry), PAZ (Pfam:PF12212), middle and PIWI (Pfam:PF02171). T ... | Domain |
A, D [auth B] | PF02171 | Piwi domain (Piwi) | Piwi domain | - | Family |
A, D [auth B] | PF12212 | PAZ domain (PAZ_2) | PAZ domain | This entry corresponds to the PAZ domain found in some archaeal argonaute proteins [1]. It is an siRNA binding domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, D [auth B] | Argonaute family protein | - | - | |
B [auth T], E [auth U] | Target DNA | - | - | - |
C [auth G], F [auth H] | Guide DNA | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, D [auth B] | IPR021103 | Argonaute PAZ domain, archaea | Domain |
A, D [auth B] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
A, D [auth B] | IPR036085 | PAZ domain superfamily | Homologous Superfamily |
A, D [auth B] | IPR003165 | Piwi domain | Domain |
A, D [auth B] | IPR003100 | PAZ domain | Domain |
A, D [auth B] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |