8VNM
Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 320s
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth A] | SCOP2B Superfamily | His-Me finger endonucleases | 8034097 | 3001893 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | His-Me finger endonucleases | 8034097 | 3001893 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth A], D [auth B] | PF05551 | Zinc-binding loop region of homing endonuclease (zf-His_Me_endon) | Zinc-binding loop region of homing endonuclease | This domain [1] is the short zinc-binding loops region of a number of much longer chain homing endonucleases. Such loops are probably stabilised by the zinc and may be viewed as small but separate domains. The common structural feature of these domai ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth C], B [auth D] | DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3') | - | - | - |
| C [auth A], D [auth B] | Intron-encoded endonuclease I-PpoI | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth A], D [auth B] | IPR008704 | Zinc-binding loop region of homing endonuclease | Domain |
| C [auth A], D [auth B] | IPR044930 | Homing endonuclease, His-Me finger superfamily | Homologous Superfamily |
| C [auth A], D [auth B] | IPR044925 | His-Me finger superfamily | Homologous Superfamily |
