8VL9
Crystal structure of EloBC-VHL-CDO1 complex bound to compound 8 molecular glue
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17211 | VHL box domain (VHL_C) | VHL box domain | This domain represents the short C-terminal alpha helical domain from the VHL protein [1]. | Domain | |
PF01847 | VHL beta domain (VHL) | VHL beta domain | VHL forms a ternary complex with the elonginB Swiss:O44226 and elonginC Swiss:O13292 proteins. This complex binds Cul2, which then is involved in regulation of vascular endothelial growth factor Swiss:P15692 mRNA. | Domain | |
PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain | |
PF03931 | Skp1 family, tetramerisation domain (Skp1_POZ) | Skp1 family, tetramerisation domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037139 | von Hippel-Lindau disease tumour suppressor, alpha domain superfamily | Homologous Superfamily | |
IPR022772 | von Hippel-Lindau disease tumour suppressor, beta/alpha domain | Domain | |
IPR024053 | von Hippel-Lindau disease tumour suppressor, beta domain | Domain | |
IPR024048 | von Hippel-Lindau disease tumour suppressor, alpha domain | Domain | |
IPR036208 | VHL superfamily | Homologous Superfamily | |
IPR037140 | von Hippel-Lindau disease tumour suppressor, beta domain superfamily | Homologous Superfamily | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR039049 | Elongin B | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR016073 | SKP1 component, POZ domain | Domain | |
IPR001232 | S-phase kinase-associated protein 1-like | Family | |
IPR039948 | Elongin-C | Family | |
IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily | |
IPR010300 | Cysteine dioxygenase type I | Family | |
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily | |
IPR011051 | RmlC-like cupin domain superfamily | Homologous Superfamily |