8V5P | pdb_00008v5p

Crystal Structure of the C-terminal domain of the VZV gE ectodomain in complex with the Fab of human antibody 5A2

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth L]HATPase_ce8v5pL01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HATPase_cECOD (v294.2)
B [auth H]HATPase_ce8v5pH01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HATPase_cECOD (v294.2)
AHATPase_ce8v5pA01 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: HATPase_cECOD (v294.2)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
C [auth L],
F [auth Y],
I [auth X],
L [auth I]		Light ChainIGKV1 Kappaenvelope glycoprotein eSAbDab (2026-05-08)
B [auth H],
E,
H [auth J],
K [auth F]		Heavy ChainIGHV4 -envelope glycoprotein eSAbDab (2026-05-08)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth L],
F [auth Y],
I [auth X],
L [auth I]		5A2 Fab Light Chain---
B [auth H],
E,
H [auth J],
K [auth F]		5A2 Fab heavy chain---
A,
D,
G,
J [auth C]		Envelope glycoprotein E- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D,
G,
J [auth C]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A,
D,
G,
J [auth C]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A,
D,
G,
J [auth C]		IPR046463Envelope glycoprotein E, N-terminalDomain
A,
D,
G,
J [auth C]		IPR003404Envelope glycoprotein E, Fc-binding domainDomain