8V41

CryoEM Structure of Diffocin - postcontracted - Baseplate - transitional state

External Resource: Annotation

Protein Family Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], JA [auth Z], K [auth m], MA [auth e], O [auth Q], R [auth n], V [auth F], Y [auth K]	PF17482	Phage tail sheath C-terminal domain (Phage_sheath_1C)	Phage tail sheath C-terminal domain	This entry represents the C-terminal domain in a variety of phage tail sheath proteins [4].	Domain
A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], JA [auth Z], K [auth m], MA [auth e], O [auth Q], R [auth n], V [auth F], Y [auth K]	PF04984	Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)	Phage tail sheath protein subtilisin-like domain	This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	Domain
A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], JA [auth Z], K [auth m], MA [auth e], O [auth Q], R [auth n], V [auth F], Y [auth K]	PF10934	Protein of unknown function (DUF2634) (DUF2634)	Protein of unknown function (DUF2634)	-	Family
A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], JA [auth Z], K [auth m], MA [auth e], O [auth Q], R [auth n], V [auth F], Y [auth K]	PF04865	Baseplate J-like protein (Baseplate_J)	Baseplate J-like protein	-	Family
AA [auth H], B [auth P], C, DA [auth h], EA [auth U], AA [auth H], B [auth P], C, DA [auth h], EA [auth U], F [auth D], HA [auth X], I [auth f], J [auth S], KA [auth c], LA [auth a], M [auth V], OA [auth b], P [auth g], Q [auth T], T [auth W], W [auth I], X [auth G]	PF17482	Phage tail sheath C-terminal domain (Phage_sheath_1C)	Phage tail sheath C-terminal domain	This entry represents the C-terminal domain in a variety of phage tail sheath proteins [4].	Domain
AA [auth H], B [auth P], C, DA [auth h], EA [auth U], AA [auth H], B [auth P], C, DA [auth h], EA [auth U], F [auth D], HA [auth X], I [auth f], J [auth S], KA [auth c], LA [auth a], M [auth V], OA [auth b], P [auth g], Q [auth T], T [auth W], W [auth I], X [auth G]	PF04984	Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)	Phage tail sheath protein subtilisin-like domain	This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	Domain
AA [auth H], B [auth P], C, DA [auth h], EA [auth U], AA [auth H], B [auth P], C, DA [auth h], EA [auth U], F [auth D], HA [auth X], I [auth f], J [auth S], KA [auth c], LA [auth a], M [auth V], OA [auth b], P [auth g], Q [auth T], T [auth W], W [auth I], X [auth G]	PF10934	Protein of unknown function (DUF2634) (DUF2634)	Protein of unknown function (DUF2634)	-	Family
AA [auth H], B [auth P], C, DA [auth h], EA [auth U], AA [auth H], B [auth P], C, DA [auth h], EA [auth U], F [auth D], HA [auth X], I [auth f], J [auth S], KA [auth c], LA [auth a], M [auth V], OA [auth b], P [auth g], Q [auth T], T [auth W], W [auth I], X [auth G]	PF04865	Baseplate J-like protein (Baseplate_J)	Baseplate J-like protein	-	Family
E [auth j], GA [auth l], L [auth i], NA [auth d], S [auth k], E [auth j], GA [auth l], L [auth i], NA [auth d], S [auth k], Z [auth J]	PF10934	Protein of unknown function (DUF2634) (DUF2634)	Protein of unknown function (DUF2634)	-	Family
BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], U [auth M]	PF17482	Phage tail sheath C-terminal domain (Phage_sheath_1C)	Phage tail sheath C-terminal domain	This entry represents the C-terminal domain in a variety of phage tail sheath proteins [4].	Domain
BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], U [auth M]	PF10076	Bacteriophage Mu-like, Gp48 (Phage_Mu_Gp48)	Bacteriophage Mu-like, Gp48	-	Family
BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], U [auth M]	PF04984	Phage tail sheath protein subtilisin-like domain (Phage_sheath_1)	Phage tail sheath protein subtilisin-like domain	This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	Domain
BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], U [auth M]	PF10934	Protein of unknown function (DUF2634) (DUF2634)	Protein of unknown function (DUF2634)	-	Family
BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], U [auth M]	PF04865	Baseplate J-like protein (Baseplate_J)	Baseplate J-like protein	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], JA [auth Z], K [auth m], MA [auth e], O [auth Q], R [auth n], V [auth F], Y [auth K]	IPR052399	Phage Baseplate Assembly Protein	Family
A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], A [auth B], CA [auth R], D [auth v], FA [auth o], H [auth O], JA [auth Z], K [auth m], MA [auth e], O [auth Q], R [auth n], V [auth F], Y [auth K]	IPR006949	Baseplate protein J-like	Domain
AA [auth H], B [auth P], C, DA [auth h], EA [auth U], AA [auth H], B [auth P], C, DA [auth h], EA [auth U], F [auth D], HA [auth X], I [auth f], J [auth S], KA [auth c], LA [auth a], M [auth V], OA [auth b], P [auth g], Q [auth T], T [auth W], W [auth I], X [auth G]	IPR020287	Tail sheath protein, C-terminal domain	Domain
AA [auth H], B [auth P], C, DA [auth h], EA [auth U], AA [auth H], B [auth P], C, DA [auth h], EA [auth U], F [auth D], HA [auth X], I [auth f], J [auth S], KA [auth c], LA [auth a], M [auth V], OA [auth b], P [auth g], Q [auth T], T [auth W], W [auth I], X [auth G]	IPR035089	Tail sheath protein, subtilisin-like domain	Domain
E [auth j], GA [auth l], L [auth i], NA [auth d], S [auth k], E [auth j], GA [auth l], L [auth i], NA [auth d], S [auth k], Z [auth J]	IPR020288	Protein of unknown function DUF2634	Family
BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], BA [auth E], G [auth A], IA [auth N], N [auth L], PA [auth Y], U [auth M]	IPR018755	Bacteriophage Mu-like, Gp48	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.