8U72
Cryo-EM structure of the SPARTA oligomer with guide RNA and target DNA
External Resource: Annotation
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth H], L [auth D], M [auth B], O [auth F] | PF13676 | TIR domain (TIR_2) | TIR domain | This is a family of Toll-like receptors. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth U], F [auth M], H [auth S], J [auth X] | RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*A)-3') | - | - | - |
B [auth V], G [auth N], I [auth T], K [auth Y] | DNA (5'-D(P*TP*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*C)-3') | - | - | - |
C [auth H], L [auth D], M [auth B], O [auth F] | TIR domain-containing protein | - | - | |
D [auth I], E, N [auth C], P [auth G] | Piwi domain-containing protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth H], L [auth D], M [auth B], O [auth F] | IPR000157 | Toll/interleukin-1 receptor homology (TIR) domain | Domain |
C [auth H], L [auth D], M [auth B], O [auth F] | IPR035897 | Toll/interleukin-1 receptor homology (TIR) domain superfamily | Homologous Superfamily |
D [auth I], E, N [auth C], P [auth G] | IPR036397 | Ribonuclease H superfamily | Homologous Superfamily |
D [auth I], E, N [auth C], P [auth G] | IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily |