Annotations: 8TEQ

Tropomyosin-receptor kinase fused gene protein (TRK-fused gene protein; TFG) Low Complexity Domain (residues 237-327) G269V mutant, amyloid fiber

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	BRCT_2	e8teqA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: BRCT_2	ECOD (v295)
E	CoV_NSP10	e8teqE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
L	CoV_NSP10	e8teqL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
Z	CoV_NSP10	e8teqZ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
Y	CoV_NSP10	e8teqY1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
X	CoV_NSP10	e8teqX1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
W	CoV_NSP10	e8teqW1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
V	CoV_NSP10	e8teqV1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
U	CoV_NSP10	e8teqU1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
T	CoV_NSP10	e8teqT1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
S	CoV_NSP10	e8teqS1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
R	CoV_NSP10	e8teqR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
Q	CoV_NSP10	e8teqQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
P	CoV_NSP10	e8teqP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
O	CoV_NSP10	e8teqO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
N	CoV_NSP10	e8teqN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
M	CoV_NSP10	e8teqM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
K	CoV_NSP10	e8teqK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
J	CoV_NSP10	e8teqJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
I	CoV_NSP10	e8teqI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
H	CoV_NSP10	e8teqH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
G	CoV_NSP10	e8teqG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
F	CoV_NSP10	e8teqF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
DA [auth 3]	CoV_NSP10	e8teq31	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
D	CoV_NSP10	e8teqD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
CA [auth 2]	CoV_NSP10	e8teq21	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
C	CoV_NSP10	e8teqC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
BA [auth 1]	CoV_NSP10	e8teq11	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
B	CoV_NSP10	e8teqB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
AA [auth 0]	CoV_NSP10	e8teq01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth 0], B, BA [auth 1], C, A, AA [auth 0], B, BA [auth 1], C, CA [auth 2], D, DA [auth 3], E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	TRK-fused gene protein Low Complexity Domain G269V mutant	identical protein binding protein binding binding	vesicle budding from membrane cellular localization transport vesicle-mediated transport cellular component organization vesicle organization cellular component biogenesis localization intercellular transport cellular component assembly establishment of localization in cell protein-containing complex assembly cellular component organization or biogenesis membrane organization vesicle budding from membrane cellular localization transport vesicle-mediated transport cellular component organization vesicle organization cellular component biogenesis localization intercellular transport cellular component assembly establishment of localization in cell protein-containing complex assembly cellular component organization or biogenesis membrane organization protein-containing complex organization intracellular transport endoplasmic reticulum to Golgi vesicle-mediated transport establishment of localization organelle organization cellular process COPII vesicle coat assembly COPII-coated vesicle budding Golgi vesicle transport vesicle coat assembly cellular response to stimulus positive regulation of cell communication regulation of cellular process positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction response to stimulus signaling positive regulation of biological process regulation of signal transduction intracellular signal transduction cell communication positive regulation of response to stimulus regulation of intracellular signal transduction intracellular signaling cassette signal transduction positive regulation of cellular process regulation of biological process regulation of signaling biological regulation positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of response to stimulus regulation of cell communication regulation of canonical NF-kappaB signal transduction positive regulation of signaling	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle endoplasmic reticulum exit site endoplasmic reticulum intracellular membrane-bounded organelle endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth 0], B, BA [auth 1], C, A, AA [auth 0], B, BA [auth 1], C, CA [auth 2], D, DA [auth 3], E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR033512	Protein TFG	Family
A, AA [auth 0], B, BA [auth 1], C, A, AA [auth 0], B, BA [auth 1], C, CA [auth 2], D, DA [auth 3], E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR000270	PB1 domain	Domain
A, AA [auth 0], B, BA [auth 1], C, A, AA [auth 0], B, BA [auth 1], C, CA [auth 2], D, DA [auth 3], E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR053793	PB1-like domain	Domain
A, AA [auth 0], B, BA [auth 1], C, A, AA [auth 0], B, BA [auth 1], C, CA [auth 2], D, DA [auth 3], E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	IPR034857	TFG, PB1 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, AA [auth 0], B, BA [auth 1], C, A, AA [auth 0], B, BA [auth 1], C, CA [auth 2], D, DA [auth 3], E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z	: Q92734	hereditary spastic paraplegia 57 hereditary motor and sensory neuropathy, Okinawa type extraskeletal myxoid chondrosarcoma hereditary spastic paraplegia peripheral neuropathy Sjogren syndrome cancer colorectal cancer IgA glomerulonephritis neurodegenerative disease pancreatic intraductal papillary-mucinous carcinoma peripheral nervous system disease Spastic Paraplegia, Hereditary Charcot-Marie-Tooth disease intellectual disability hereditary spastic paraplegia 57 hereditary motor and sensory neuropathy, Okinawa type extraskeletal myxoid chondrosarcoma hereditary spastic paraplegia peripheral neuropathy Sjogren syndrome cancer colorectal cancer IgA glomerulonephritis neurodegenerative disease pancreatic intraductal papillary-mucinous carcinoma peripheral nervous system disease Spastic Paraplegia, Hereditary Charcot-Marie-Tooth disease intellectual disability pancreatic intraductal papillary-mucinous neoplasm thyroid gland papillary carcinoma Charcot-Marie-Tooth disease type 2 lung cancer osteosarcoma paraplegia

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8TEQ | pdb_00008teq

Tropomyosin-receptor kinase fused gene protein (TRK-fused gene protein; TFG) Low Complexity Domain (residues 237-327) G269V mutant, amyloid fiber

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation