8TB9
PRC2-J119-450 monomer bound to H1-nucleosome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8094387 | 3000034 | SCOP2B (2022-06-29) |
J [auth R] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
M [auth U] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
K [auth S] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
N [auth V] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | VEFS box-like | 8090819 | 3002459 | SCOP2B (2022-06-29) |
G [auth I] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
O [auth W] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
H [auth J] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
P [auth X] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
I [auth O] | SCOP2B Superfamily | WD40 repeat-like | 8053350 | 3001694 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00538 | linker histone H1 and H5 family (Linker_histone) | linker histone H1 and H5 family | Linker histone H1 is an essential component of chromatin structure. H1 links nucleosomes into higher order structures Histone H1 is replaced by histone H5 in some cell types. | Domain | |
J [auth R], M [auth U] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
C [auth D] | PF09733 | VEFS-Box of polycomb protein (VEFS-Box) | VEFS-Box of polycomb protein | - | Family |
D [auth E] | PF18264 | CXC domain (preSET_CXC) | CXC domain | This domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain. | Domain |
D [auth E] | PF00856 | SET domain (SET) | SET domain | - | Family |
D [auth E] | PF18118 | Polycomb repressive complex 2 tri-helical domain (PRC2_HTH_1) | Polycomb repressive complex 2 tri-helical domain | This domain can be found in the Polycomb repressive complex 2 (PRC2) present in Homo sapiens. Polycomb complexes maintain repressive chromatin states by silencing gene expression. PRC2 does this by methylating lysine 27 of histone H3. This domain mak ... | Domain |
D [auth E] | PF11616 | WD repeat binding protein EZH2 (EZH2_WD-Binding) | WD repeat binding protein EZH2 | - | Family |
D [auth E] | PF21358 | Ezh2, MCSS domain (Ezh2_MCSS) | Ezh2, MCSS domain | This entry represents the MCSS domain found in the middle region of the Histone-lysine N-methyltransferase EZH2 [1-5]. It makes contacts with the adjacent SANT domain and the Vefs domain from EED. Additionally, this domain contains a zinc-binding mot ... | Domain |
E [auth G] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
H [auth J], P [auth X] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
I [auth O] | PF12265 | Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd) | Histone-binding protein RBBP4 or subunit C of CAF1 complex | - | Repeat |
I [auth O] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |