8SP6 | pdb_00008sp6

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Chromo domain-like	8062263	3000161	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Chromo domain-like	8062263	3000161	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Chromo domain-like	8062263	3000161	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Chromo domain-like	8062263	3000161	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Chromo domain-like	8062263	3000161	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Chromo domain-like	8062263	3000161	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	WD40	e8sp6A1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
B	WD40	e8sp6B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C	WD40	e8sp6C1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
E	WD40	e8sp6E1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
F	WD40	e8sp6F1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
D	WD40	e8sp6D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF00385	Chromo (CHRromatin Organisation MOdifier) domain (Chromo)	Chromo (CHRromatin Organisation MOdifier) domain		Domain

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Chromodomain Y-like protein 2	transcription corepressor activity transcription regulator activity transcription coregulator activity histone H3K9me2/3 reader activity histone reader activity histone H3 reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity molecular adaptor activity histone H3K27me3 reader activity	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
G, H, I, J, K G, H, I, J, K, L	(5R0)FAL(MLZ)(5R5)	-	-	-

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR051053	Enoyl-CoA hydratase/isomerase and chromodomain-containing protein	Family
A, B, C, D, E A, B, C, D, E, F	IPR000953	Chromo/chromo shadow domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR029045	ClpP/crotonase-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR023780	Chromo domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR001753	Enoyl-CoA hydratase/isomerase-like domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR016197	Chromo-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR014748	Enoyl-CoA hydratase, C-terminal	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR023779	Chromo domain, conserved site	Conserved Site

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F	: Q8N8U2	subependymal giant cell astrocytoma astrocytic tumor cancer glioblastoma large cell medulloblastoma medulloblastoma osteosarcoma pituitary cancer ulcerative colitis atypical teratoid rhabdoid tumor cystic fibrosis inflammatory bowel disease malignant ependymoma nodular sclerosis classical Hodgkin lymphoma ovarian cancer subependymal giant cell astrocytoma astrocytic tumor cancer glioblastoma large cell medulloblastoma medulloblastoma osteosarcoma pituitary cancer ulcerative colitis atypical teratoid rhabdoid tumor cystic fibrosis inflammatory bowel disease malignant ependymoma nodular sclerosis classical Hodgkin lymphoma ovarian cancer primitive neuroectodermal tumor breast carcinoma ductal breast carcinoma in situ invasive ductal breast carcinoma malignant glioma oligodendroglioma pilocytic astrocytoma

Modified Residue(s)
Chain	Residue(s)	Description
G, H, I, J, K G, H, I, J, K, L	5R0
G, H, I, J, K G, H, I, J, K, L	5R5	Parent Component: SER
G, H, I, J, K G, H, I, J, K, L	MLZ	Parent Component: LYS : AA0076 : N6-methyl-L-lysine MOD:00085

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.