8SNH
cytochrome bc1-cbb3 supercomplex from Pseudomonas aeruginosa
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PF00115 | e8snhE1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
G [auth Z] | PF00355 | e8snhZ2 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: PF00355 | ECOD (1.6) |
G [auth Z] | PF10399 | e8snhZ1 | A: extended segments | X: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | T: iron-sulfur subunit (ISP) transmembrane anchor | F: PF10399 | ECOD (1.6) |
B [auth C] | PF00355 | e8snhC2 | A: beta sandwiches | X: ISP domain (From Topology) | H: ISP domain (From Topology) | T: ISP domain | F: PF00355 | ECOD (1.6) |
B [auth C] | PF10399 | e8snhC1 | A: extended segments | X: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology) | T: iron-sulfur subunit (ISP) transmembrane anchor | F: PF10399 | ECOD (1.6) |
C [auth I] | PF00032 | e8snhI1 | A: alpha bundles | X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: PF00032 | ECOD (1.6) |
C [auth I] | PF00033 | e8snhI2 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: PF00033 | ECOD (1.6) |
H [auth D] | PF00032 | e8snhD2 | A: alpha bundles | X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology) | T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | F: PF00032 | ECOD (1.6) |
H [auth D] | PF00033 | e8snhD1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: PF00033 | ECOD (1.6) |
D [auth J] | PF02167 | e8snhJ1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02167 | ECOD (1.6) |
D [auth J] | F_UNCLASSIFIED | e8snhJ2 | A: extended segments | X: cytochrome c1 transmembrane anchor (From Topology) | H: cytochrome c1 transmembrane anchor (From Topology) | T: cytochrome c1 transmembrane anchor | F: F_UNCLASSIFIED | ECOD (1.6) |
I [auth M] | PF02167 | e8snhM1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02167 | ECOD (1.6) |
I [auth M] | F_UNCLASSIFIED | e8snhM2 | A: extended segments | X: cytochrome c1 transmembrane anchor (From Topology) | H: cytochrome c1 transmembrane anchor (From Topology) | T: cytochrome c1 transmembrane anchor | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth K] | PF00034 | e8snhK2 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF00034 | ECOD (1.6) |
J [auth N] | PF00034 | e8snhN2 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF00034 | ECOD (1.6) |
L [auth F] | PF02433 | e8snhF1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF02433 | ECOD (1.6) |
M [auth G] | PF13442 | e8snhG1 | A: alpha arrays | X: Cytochrome c-like | H: Cytochrome c (From Topology) | T: Cytochrome c | F: PF13442 | ECOD (1.6) |
M [auth G] | PF14715 | e8snhG3 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: PF14715 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth E] | PF00115 | Cytochrome C and Quinol oxidase polypeptide I (COX1) | Cytochrome C and Quinol oxidase polypeptide I | - | Family |
B [auth C], G [auth Z] | PF10399 | Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal (UCR_Fe-S_N) | Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal | - | Motif |
B [auth C], G [auth Z] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
C [auth I], H [auth D] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | - | Domain |
C [auth I], H [auth D] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | - | Domain |
D [auth J], I [auth M] | PF02167 | Cytochrome C1 family (Cytochrom_C1) | Cytochrome C1 family | - | Family |
E [auth K], J [auth N] | PF00034 | Cytochrome c (Cytochrom_C) | Cytochrome c | The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, Pfam:PF06181, has now been merged into this family. | Domain |
L [auth F] | PF02433 | Cytochrome C oxidase, mono-heme subunit/FixO (FixO) | Cytochrome C oxidase, mono-heme subunit/FixO | - | Family |
M [auth G] | PF14715 | N-terminal domain of cytochrome oxidase-cbb3, FixP (FixP_N) | N-terminal domain of cytochrome oxidase-cbb3, FixP | This is the N-terminal domain of FixP, the cytochrome oxidase type-cbb3. the exact function is not known. | Domain |
M [auth G] | PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |