8RXH

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
KB [auth SH]SCOP2B SuperfamilyRibosomal protein S78066021 3000799 SCOP2B (2021-05-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth LB]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
K [auth LC]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
K [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
K [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth LD]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
L [auth LD]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
L [auth LD]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
M [auth LE]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
M [auth LE]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
N [auth LF]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
N [auth LF]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
O [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
O [auth LG]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
P [auth LH]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
Q [auth LI]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
Q [auth LI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
R [auth LJ]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
R [auth LJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
S [auth LK]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
S [auth LK]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
S [auth LK]PF00467KOW motif (KOW)KOW motif- Family
T [auth LL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
T [auth LL]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
U [auth LM]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
U [auth LM]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
V [auth LN]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
W [auth LO]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
W [auth LO]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
W [auth LO]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
X [auth LP]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
X [auth LP]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Y [auth LQ]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
Z [auth LR]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
BA [auth LT]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
CA [auth LU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
DA [auth LV]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
EA [auth LW]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
EA [auth LW]PF00467KOW motif (KOW)KOW motif- Family
FA [auth LX]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
GA [auth LY]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
GA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
HA [auth LZ]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
DB [auth SA]PF03297S25 ribosomal protein (Ribosomal_S25)S25 ribosomal protein- Family
DB [auth SA]PF01015Ribosomal S3Ae family (Ribosomal_S3Ae)Ribosomal S3Ae family- Family
EB [auth SB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
EB [auth SB]PF01283Ribosomal protein S26e (Ribosomal_S26e)Ribosomal protein S26e- Family
FB [auth SC]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
FB [auth SC]PF07650KH domain (KH_2)KH domain- Domain
FB [auth SC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
GB [auth SD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
GB [auth SD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
HB [auth SE]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
HB [auth SE]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
HB [auth SE]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
HB [auth SE]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
HB [auth SE]PF00467KOW motif (KOW)KOW motif- Family
IB [auth SF]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
IB [auth SF]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
IB [auth SF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
JB [auth SG]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
JB [auth SG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
KB [auth SH]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
LB [auth SI]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
MB [auth SJ]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
NB [auth SK]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
OB [auth SL]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PB [auth SM]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
QB [auth SN]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
RB [auth SO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
SB [auth SP]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
TB [auth SQ]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
UB [auth SR]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VB [auth SS]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
WB [auth ST]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
WB [auth ST]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
ZB [auth SW]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
AC [auth SX]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
BC [auth SY]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
CC [auth SZ]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
I [auth LA]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
I [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
I [auth LA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L1]LSUa_rRNA_chain_1---
J [auth LB]Putative ribosomal protein L3
K [auth LC]Putative ribosomal protein L1a
L [auth LD]60S ribosomal protein L11
M [auth LE]Putative 60S ribosomal protein L9
N [auth LF]Putative 60S ribosomal protein L6
O [auth LG]60S ribosomal protein L7a
P [auth LH]Putative 60S ribosomal protein L13a
Q [auth LI]Putative 60S ribosomal protein L13
R [auth LJ]Putative 60S ribosomal protein L23
S [auth LK]Putative 40S ribosomal protein L14
B [auth L2]LSUb_rRNA_chain_2---
T [auth LL]Putative 60S ribosomal protein L27A/L29
U [auth LM]Ribosomal protein L15
V [auth LN]Putative 60S ribosomal protein L10
W [auth LO]Putative 60S ribosomal protein L5
X [auth LP]60S ribosomal protein L18
Y [auth LQ]Putative 60S ribosomal protein L19
Z [auth LR]60S ribosomal protein L18a
AA [auth LS]Putative 60S ribosomal protein L21
BA [auth LT]Putative 60S ribosomal protein L17
CA [auth LU]Putative 60S ribosomal protein L22
C [auth L3]SR1_chain_3---
DA [auth LV]Putative 60S ribosomal protein L23a
EA [auth LW]Putative 60S ribosomal protein L26
FA [auth LX]Putative ribosomal protein L24
GA [auth LY]60S ribosomal protein L27
HA [auth LZ]Putative 60S ribosomal protein L28
IA [auth La]Putative 60S ribosomal protein L35
JA [auth Lb]60S ribosomal protein L29
KA [auth Lc]Putative 60S ribosomal protein L7
LA [auth Ld]60S ribosomal protein L30 -
MA [auth Le]Putative 60S ribosomal subunit protein L31
D [auth L4]SR2_chain_4---
NA [auth Lf]60S ribosomal protein L32
OA [auth Lg]Putative ribosomal protein l35a
PA [auth Lh]Putative 60S ribosomal protein L34
QA [auth Li]Putative 60S Ribosomal protein L36
RA [auth Lj]Ribosomal protein L37
SA [auth Lk]Putative ribosomal protein L38
TA [auth Ll]Putative 60S ribosomal protein L39
UA [auth Lm]Ubiquitin-60S ribosomal protein L40
VA [auth Ln]60S ribosomal protein L41---
WA [auth Lo]60S ribosomal protein L37a
E [auth L5]SR4_chain_5---
XA [auth Lp]Putative 60S ribosomal protein L44
YA [auth S1]SSU_rRNA_chain_S1---
ZA [auth S2]A-site_tRNA_chain_S2---
AB [auth S3]P-site_tRNA_chain_S3---
BB [auth S4]E-site_tRNA_chain_S4---
CB [auth S5]mRNA_chain_S5---
DB [auth SA]40S ribosomal protein S3a
EB [auth SB]40S ribosomal protein SA
FB [auth SC]Putative 40S ribosomal protein S3
GB [auth SD]Putative 40S ribosomal protein S9
F [auth L6]SR6_chain_6---
HB [auth SE]40S ribosomal protein S4
IB [auth SF]40S ribosomal protein S2
JB [auth SG]40S ribosomal protein S6
KB [auth SH]40S ribosomal protein S5
LB [auth SI]40S ribosomal protein S7
MB [auth SJ]Putative 40S ribosomal protein S15A
NB [auth SK]40S ribosomal protein S8
OB [auth SL]Putative 40S ribosomal protein S16
PB [auth SM]Putative ribosomal protein S20
QB [auth SN]Putative 40S ribosomal protein S10 -
G [auth L7]5.8S_rRNA_chain_7---
RB [auth SO]40S ribosomal protein S14
SB [auth SP]Putative 40S ribosomal protein S23
TB [auth SQ]40S ribosomal protein S12
UB [auth SR]Putative 40S ribosomal protein S18
VB [auth SS]Putative ribosomal protein S29
WB [auth ST]Putative 40S ribosomal protein S13
XB [auth SU]Ribosomal protein S17 family protein---
YB [auth SV]Putative 40S ribosomal protein S17
ZB [auth SW]Putative 40S ribosomal protein S15
AC [auth SX]40S ribosomal protein S19-like protein
H [auth L8]5S_rRNA_chain_8---
BC [auth SY]Putative 40S ribosomal protein S21
CC [auth SZ]40S ribosomal protein S24
DC [auth Sa]40S ribosomal protein S25 -
EC [auth Sb]40S ribosomal protein S26
FC [auth Sc]Putative 40S ribosomal protein S27-1
GC [auth Sd]Putative 40S ribosomal protein S33
HC [auth Se]40S ribosomal protein S30
IC [auth Sf]Ubiquitin-60S ribosomal protein L40
JC [auth Sg]Guanine nucleotide-binding protein subunit beta-like protein
KC [auth Sh]Putative RNA binding protein -
I [auth LA]Putative 60S ribosomal protein L2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
J [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
J [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
J [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
J [auth LB]IPR000597Large ribosomal subunit protein uL3Family
K [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
K [auth LC]IPR002136Large ribosomal subunit protein uL4Family
K [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
K [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
K [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
L [auth LD]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
L [auth LD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
L [auth LD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
L [auth LD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
L [auth LD]IPR002132Large ribosomal subunit protein uL5Family
M [auth LE]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
M [auth LE]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
M [auth LE]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
M [auth LE]IPR000702Large ribosomal subunit protein uL6-likeFamily
N [auth LF]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth LF]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
N [auth LF]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth LF]IPR000915Large ribosomal subunit protein eL6Family
O [auth LG]IPR001921Large ribosomal subunit protein eL8Family
O [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
O [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
O [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
P [auth LH]IPR005822Large ribosomal subunit protein uL13Family
P [auth LH]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
P [auth LH]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
Q [auth LI]IPR001380Large ribosomal subunit protein eL13Family
R [auth LJ]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
R [auth LJ]IPR000218Large ribosomal subunit protein uL14Family
R [auth LJ]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
S [auth LK]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
S [auth LK]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
S [auth LK]IPR039660Large ribosomal subunit protein eL14Family
S [auth LK]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
S [auth LK]IPR002784Large ribosomal subunit protein eL14 domainDomain
S [auth LK]IPR005824KOWDomain
T [auth LL]IPR021131Large ribosomal subunit protein uL15/eL18Domain
T [auth LL]IPR030878Large ribosomal subunit protein uL15Family
T [auth LL]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
U [auth LM]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U [auth LM]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
U [auth LM]IPR000439Large ribosomal subunit protein eL15Family
V [auth LN]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
V [auth LN]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
V [auth LN]IPR016180Large ribosomal subunit protein uL16 domainDomain
V [auth LN]IPR047873Large ribosomal subunit protein uL16Family
V [auth LN]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
W [auth LO]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
W [auth LO]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
X [auth LP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
X [auth LP]IPR000039Large ribosomal subunit protein eL18Family
X [auth LP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth LQ]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Y [auth LQ]IPR039547Large ribosomal subunit protein eL19Family
Y [auth LQ]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Y [auth LQ]IPR000196Large ribosomal subunit protein eL19 domainDomain
Y [auth LQ]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Z [auth LR]IPR028877Large ribosomal subunit protein eL20Family
Z [auth LR]IPR023573Large ribosomal subunit protein eL20 domainDomain
Z [auth LR]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
AA [auth LS]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
AA [auth LS]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
AA [auth LS]IPR001147Large ribosomal subunit protein eL21Family
AA [auth LS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth LT]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
BA [auth LT]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
BA [auth LT]IPR001063Large ribosomal subunit protein uL22Family
BA [auth LT]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
CA [auth LU]IPR002671Large ribosomal subunit protein eL22Family
CA [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
DA [auth LV]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
DA [auth LV]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
DA [auth LV]IPR019985Large ribosomal subunit protein uL23Family
DA [auth LV]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
DA [auth LV]IPR013025Large ribosomal subunit protein uL23-likeFamily
EA [auth LW]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
EA [auth LW]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
EA [auth LW]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
EA [auth LW]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
EA [auth LW]IPR005824KOWDomain
FA [auth LX]IPR000988Large ribosomal subunit protein eL24-relatedFamily
FA [auth LX]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
GA [auth LY]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
GA [auth LY]IPR005824KOWDomain
GA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GA [auth LY]IPR001141Large ribosomal subunit protein eL27Family
GA [auth LY]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
HA [auth LZ]IPR029004Ribosomal eL28/Mak16Domain
HA [auth LZ]IPR002672Large ribosomal subunit protein eL28Family
IA [auth La]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
IA [auth La]IPR001854Large ribosomal subunit protein uL29Family
IA [auth La]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
JA [auth Lb]IPR002673Large ribosomal subunit protein eL29Family
KA [auth Lc]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
KA [auth Lc]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
KA [auth Lc]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
KA [auth Lc]IPR039699Large ribosomal subunit protein uL30Family
KA [auth Lc]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
KA [auth Lc]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
KA [auth Lc]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
LA [auth Ld]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
LA [auth Ld]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
LA [auth Ld]IPR039109Large ribosomal subunit protein eL30-likeFamily
LA [auth Ld]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
MA [auth Le]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
MA [auth Le]IPR000054Large ribosomal subunit protein eL31Family
NA [auth Lf]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
NA [auth Lf]IPR001515Large ribosomal subunit protein eL32Family
OA [auth Lg]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
OA [auth Lg]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
OA [auth Lg]IPR001780Large ribosomal subunit protein eL33Family
PA [auth Lh]IPR008195Large ribosomal subunit protein eL34Family
QA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
QA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
RA [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
RA [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
RA [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
SA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
SA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
TA [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
TA [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
TA [auth Ll]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
UA [auth Lm]IPR019954Ubiquitin conserved siteConserved Site
UA [auth Lm]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
UA [auth Lm]IPR000626Ubiquitin-like domainDomain
UA [auth Lm]IPR019956Ubiquitin domainDomain
UA [auth Lm]IPR001975Large ribosomal subunit protein eL40 domainDomain
UA [auth Lm]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
UA [auth Lm]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth Lo]IPR002674Large ribosomal subunit protein eL43Family
WA [auth Lo]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth Lo]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
XA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
XA [auth Lp]IPR000552Large ribosomal subunit protein eL42Family
DB [auth SA]IPR001593Small ribosomal subunit protein eS1Family
DB [auth SA]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
EB [auth SB]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
EB [auth SB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
EB [auth SB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
EB [auth SB]IPR001865Small ribosomal subunit protein uS2Family
EB [auth SB]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
FB [auth SC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
FB [auth SC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
FB [auth SC]IPR004044K Homology domain, type 2Domain
FB [auth SC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
FB [auth SC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
FB [auth SC]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
GB [auth SD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GB [auth SD]IPR002942RNA-binding S4 domainDomain
GB [auth SD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GB [auth SD]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
GB [auth SD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
GB [auth SD]IPR022801Small ribosomal subunit protein uS4Family
HB [auth SE]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
HB [auth SE]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
HB [auth SE]IPR002942RNA-binding S4 domainDomain
HB [auth SE]IPR013845Small ribosomal subunit protein eS4, central regionDomain
HB [auth SE]IPR000876Small ribosomal subunit protein eS4Family
HB [auth SE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
HB [auth SE]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
HB [auth SE]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
HB [auth SE]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
HB [auth SE]IPR005824KOWDomain
IB [auth SF]IPR000851Small ribosomal subunit protein uS5Family
IB [auth SF]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
IB [auth SF]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
IB [auth SF]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
IB [auth SF]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IB [auth SF]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
IB [auth SF]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JB [auth SG]IPR014401Small ribosomal subunit protein eS6-likeFamily
JB [auth SG]IPR001377Small ribosomal subunit protein eS6Family
JB [auth SG]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
KB [auth SH]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
KB [auth SH]IPR000235Small ribosomal subunit protein uS7Family
KB [auth SH]IPR023798Small ribosomal subunit protein uS7 domainDomain
KB [auth SH]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
LB [auth SI]IPR000554Small ribosomal subunit protein eS7Family
MB [auth SJ]IPR000630Small ribosomal subunit protein uS8Family
MB [auth SJ]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
MB [auth SJ]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
NB [auth SK]IPR001047Small ribosomal subunit protein eS8Family
NB [auth SK]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
NB [auth SK]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
NB [auth SK]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
OB [auth SL]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
OB [auth SL]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
OB [auth SL]IPR000754Small ribosomal subunit protein uS9Family
OB [auth SL]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth SM]IPR001848Small ribosomal subunit protein uS10Family
PB [auth SM]IPR027486Small ribosomal subunit protein uS10 domainDomain
PB [auth SM]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
PB [auth SM]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
QB [auth SN]IPR037447Small ribosomal subunit protein eS10Family
QB [auth SN]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
QB [auth SN]IPR005326Plectin/eS10, N-terminalDomain
RB [auth SO]IPR001971Small ribosomal subunit protein uS11Family
RB [auth SO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
RB [auth SO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
SB [auth SP]IPR006032Small ribosomal subunit protein uS12Family
SB [auth SP]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SB [auth SP]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
TB [auth SQ]IPR000530Small ribosomal subunit protein eS12Family
TB [auth SQ]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
TB [auth SQ]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
UB [auth SR]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
UB [auth SR]IPR001892Small ribosomal subunit protein uS13Family
UB [auth SR]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
UB [auth SR]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
VB [auth SS]IPR001209Small ribosomal subunit protein uS14Family
VB [auth SS]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
VB [auth SS]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
WB [auth ST]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
WB [auth ST]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
WB [auth ST]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
WB [auth ST]IPR000589Small ribosomal subunit protein uS15Family
YB [auth SV]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
YB [auth SV]IPR001210Small ribosomal subunit protein eS17Family
ZB [auth SW]IPR002222Small ribosomal subunit protein uS19Family
ZB [auth SW]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
ZB [auth SW]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
ZB [auth SW]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
AC [auth SX]IPR001266Small ribosomal subunit protein eS19Family
AC [auth SX]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
AC [auth SX]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
BC [auth SY]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
BC [auth SY]IPR001931Small ribosomal subunit protein eS21Family
CC [auth SZ]IPR001976Small ribosomal subunit protein eS24Family
CC [auth SZ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CC [auth SZ]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
DC [auth Sa]IPR004977Small ribosomal subunit protein eS25Family
DC [auth Sa]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
EC [auth Sb]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
EC [auth Sb]IPR000892Small ribosomal subunit protein eS26Family
FC [auth Sc]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
FC [auth Sc]IPR000592Small ribosomal subunit protein eS27Family
FC [auth Sc]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GC [auth Sd]IPR028626Ribosomal protein eS28 conserved siteConserved Site
GC [auth Sd]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GC [auth Sd]IPR000289Small ribosomal subunit protein eS28Family
HC [auth Se]IPR006846Small ribosomal subunit protein eS30Family
IC [auth Sf]IPR000626Ubiquitin-like domainDomain
IC [auth Sf]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
IC [auth Sf]IPR002906Small ribosomal subunit protein eS31Domain
IC [auth Sf]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IC [auth Sf]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JC [auth Sg]IPR019775WD40 repeat, conserved siteConserved Site
JC [auth Sg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
JC [auth Sg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
JC [auth Sg]IPR001680WD40 repeatRepeat
JC [auth Sg]IPR020472G-protein beta WD-40 repeatRepeat
JC [auth Sg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
KC [auth Sh]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
KC [auth Sh]IPR000504RNA recognition motif domainDomain
KC [auth Sh]IPR035979RNA-binding domain superfamilyHomologous Superfamily
I [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
I [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
I [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
I [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
I [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
I [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
I [auth LA]IPR002171Large ribosomal subunit protein uL2Family