8RTS | pdb_00008rts

Structure of a homomeric human LRRC8C Volume-Regulated Anion Channel

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
G	CoV_Methyltr_2	e8rtsG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
F	CoV_Methyltr_2	e8rtsF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
E	CoV_Methyltr_2	e8rtsE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
D	CoV_Methyltr_2	e8rtsD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
C	CoV_Methyltr_2	e8rtsC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
B	CoV_Methyltr_2	e8rtsB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
A	Pannexin_like	e8rtsA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Pannexin_like	ECOD (v295)
A	AAA_25	e8rtsA02	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_25	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G	PF13855	Leucine rich repeat (LRR_8)	Leucine rich repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G	Volume-regulated anion channel subunit LRRC8C	volume-sensitive anion channel activity monoatomic anion transmembrane transporter activity passive transmembrane transporter activity monoatomic ion channel activity channel activity monoatomic anion channel activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity	cellular component organization cellular component biogenesis protein hexamerization cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis transmembrane transport organic acid transport localization nitrogen compound transport transport cellular component organization cellular component biogenesis protein hexamerization cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis transmembrane transport organic acid transport localization nitrogen compound transport transport alkanesulfonate transmembrane transport sulfur compound transport establishment of localization taurine transmembrane transport cellular response to stimulus response to osmotic stress response to stimulus cellular response to chemical stress cellular response to osmotic stress cellular response to environmental stimulus cellular response to chemical stimulus cellular response to stress response to stress response to chemical response to abiotic stimulus cellular response to abiotic stimulus import into cell guanine nucleotide transmembrane transport nucleotide transport purine ribonucleotide transport import across plasma membrane carbohydrate derivative transport purine nucleotide transport adenine nucleotide transport nucleotide transmembrane transport cyclic-GMP-AMP transmembrane import across plasma membrane guanine nucleotide transport cyclic nucleotide transport nucleobase-containing compound transport organophosphate ester transport purine-containing compound transmembrane transport carboxylic acid transport carboxylic acid transmembrane transport aspartate transmembrane transport amino acid transmembrane transport C4-dicarboxylate transport amino acid transport acidic amino acid transport dicarboxylic acid transport monoatomic ion transmembrane transport monoatomic anion transport monoatomic anion transmembrane transport monoatomic ion transport	cellular anatomical structure membrane cell periphery plasma membrane intracellular anatomical structure cytoplasm protein-containing complex transmembrane transporter complex membrane protein complex transporter complex monoatomic ion channel complex membrane-bounded organelle organelle subcompartment intracellular membrane-bounded organelle cellular anatomical structure membrane cell periphery plasma membrane intracellular anatomical structure cytoplasm protein-containing complex transmembrane transporter complex membrane protein complex transporter complex monoatomic ion channel complex membrane-bounded organelle organelle subcompartment intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G	IPR001611	Leucine-rich repeat	Repeat
A, B, C, D, E A, B, C, D, E, F, G	IPR021040	LRRC8, pannexin-like TM region	Domain
A, B, C, D, E A, B, C, D, E, F, G	IPR003591	Leucine-rich repeat, typical subtype	Repeat
A, B, C, D, E A, B, C, D, E, F, G	IPR050216	Leucine-rich repeat domain-containing protein	Family
A, B, C, D, E A, B, C, D, E, F, G	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F, G	: Q8TDW0	astrocytic tumor interstitial cystitis malignant ependymoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm tuberculosis cystic fibrosis invasive ductal breast carcinoma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ulcerative colitis ductal breast carcinoma in situ large cell medulloblastoma oligodendroglioma astrocytic tumor interstitial cystitis malignant ependymoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm tuberculosis cystic fibrosis invasive ductal breast carcinoma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ulcerative colitis ductal breast carcinoma in situ large cell medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma sarcoidosis

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Channels: Other Ion Channels	LRRC8C volume-regulated anion channel

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.