Annotations: 8ROQ

FAdV-C4 Aviadenovirus structure, strain KR5

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N	Arf	e8roqN01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Arf	ECOD (v295)
M	Arf	e8roqM01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Arf	ECOD (v295)
L	CoV_Methyltr_2	e8roqL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
K	CoV_Methyltr_2	e8roqK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
J	CoV_Methyltr_2	e8roqJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
I	CoV_Methyltr_2	e8roqI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
H	CoV_Methyltr_2	e8roqH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
G	CoV_Methyltr_2	e8roqG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
F	CoV_Methyltr_2	e8roqF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
E	CoV_Methyltr_2	e8roqE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
D	CoV_Methyltr_2	e8roqD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
C	CoV_Methyltr_2	e8roqC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
B	CoV_Methyltr_2	e8roqB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_Methyltr_2	ECOD (v295)
A	Arf	e8roqA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Arf	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
O, P	Pre-hexon-linking protein VIII	hexon binding protein binding binding	-	viral capsid virion component host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle
N	PIIIa	-	-	viral capsid virion component viral capsid, decoration
M	Penton protein	structural molecule activity	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell	host intracellular membrane-bounded organelle host cellular component host intracellular part cellular anatomical structure host cell part host intracellular region host cell nucleus other organism part host intracellular organelle viral capsid icosahedral viral capsid virion component T=25 icosahedral viral capsid
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Hexon protein	-	biological process involved in interspecies interaction between organisms microtubule-dependent intracellular transport of viral material microtubule-dependent intracellular transport of viral material towards nucleus intracellular transport of virus viral process viral life cycle transport of virus transport of viral material towards nucleus biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host biological process involved in interaction with host	host cellular component cellular anatomical structure host cell other organism part host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle viral capsid icosahedral viral capsid virion component T=25 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
O, P	IPR000646	Pre-hexon-linking protein VIII	Family
N	IPR003479	Pre-hexon-linking protein IIIa	Family
N	IPR043053	Pre-hexon-linking protein IIIa, N-terminal	Homologous Superfamily
M	IPR002605	Adenovirus penton base protein	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR044942	Adenovirus Pll, hexon, subdomain 2	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR016110	Adenovirus Pll, hexon, subdomain 3	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR016107	Adenovirus Pll, hexon, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR016108	Adenovirus Pll, hexon, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR016112	Group II dsDNA virus coat/capsid protein	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8ROQ | pdb_00008roq

FAdV-C4 Aviadenovirus structure, strain KR5

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage