8RGZ

Trimeric HSV-1F gB ectodomain in postfusion conformation with three bound HDIT101 Fab molecules.

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth D],
F [auth H],
G [auth F]		Heavy ChainIGHV2 -envelope glycoprotein bSAbDab (2024-08-02)
C [auth E],
H [auth L],
I [auth G]		Light ChainIGKV1 Kappaenvelope glycoprotein bSAbDab (2024-08-02)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
D [auth B],
E [auth C]		PF00606Herpesvirus Glycoprotein B ectodomain (Glycoprotein_B)Herpesvirus Glycoprotein B ectodomainThis domain corresponds to the ectodomain of glycoprotein B according to ECOD.Domain
A,
D [auth B],
E [auth C]		PF17417Herpesvirus Glycoprotein B PH-like domain (Glycoprot_B_PH2)Herpesvirus Glycoprotein B PH-like domainThis domain corresponds to the second PH-like domain in herpesvirus glycoprotein B.Domain
A,
D [auth B],
E [auth C]		PF17416Herpesvirus Glycoprotein B (Glycoprot_B_PH1)Herpesvirus Glycoprotein BThis domain has a PH-like fold.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
D [auth B],
E [auth C]		Envelope glycoprotein B-
B [auth D],
F [auth H],
G [auth F]		HDIT101 Fab heavy chain---
C [auth E],
H [auth L],
I [auth G]		HDIT101 Fab light chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth B],
E [auth C]		IPR000234Herpesvirus Glycoprotein BFamily
A,
D [auth B],
E [auth C]		IPR035381Herpesvirus Glycoprotein B, PH-like domain 2Domain
A,
D [auth B],
E [auth C]		IPR035377Herpesvirus Glycoprotein B, PH-like domain 1Domain
A,
D [auth B],
E [auth C]		IPR038631Herpesvirus Glycoprotein B, PH-like domain 2 superfamilyHomologous Superfamily