Annotations: 8R0T

STRUCTURE OF THE MOUSE FCGBP DIMER PROTEIN IN ITS SEMIEXTENDED CONFORMATION

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth F]	WD40	e8r0tF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
C		e8r0tC02	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)
B		e8r0tB01	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)
A	TIL	e8r0tA02	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: TIL	ECOD (v294.2)
A		e8r0tA03	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F:	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C, D [auth F]	PF08742	C8 domain (C8)	C8 domain	This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often fo ...	This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often found on proteins containing Pfam:PF00094 and Pfam:PF01826.	Domain
C, D [auth F]	PF01826	Trypsin Inhibitor like cysteine rich domain (TIL)	Trypsin Inhibitor like cysteine rich domain	This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, ...	This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.	Domain
C, D [auth F]	PF00094	von Willebrand factor type D domain (VWD)	von Willebrand factor type D domain	Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2 ...	Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2].	Domain
C, D [auth F]	PF12714	TILa domain (TILa)	TILa domain	This cysteine rich domain occurs along side the TIL Pfam:PF01826 domain and is likely to be a distantly related relative.	Domain
B	PF08742	C8 domain (C8)	C8 domain	This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often fo ...	This domain contains 8 conserved cysteine residues, but this family only contains 7 of them to overlaps with other domains. It is found in disease-related proteins including von Willebrand factor, Alpha tectorin, Zonadhesin and Mucin. It is often found on proteins containing Pfam:PF00094 and Pfam:PF01826.	Domain
B	PF01826	Trypsin Inhibitor like cysteine rich domain (TIL)	Trypsin Inhibitor like cysteine rich domain	This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, ...	This family contains trypsin inhibitors as well as a domain found in many extracellular proteins. The domain typically contains ten cysteine residues that form five disulphide bonds. The cysteine residues that form the disulphide bonds are 1-7, 2-6, 3-5, 4-10 and 8-9.	Domain
B	PF00094	von Willebrand factor type D domain (VWD)	von Willebrand factor type D domain	Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2 ...	Swiss:P17554 contains a vwd domain. Its function is unrelated but the similarity is very strong by several methods. This domain is structurally homologous to the C-terminal domain of repulsive guidance molecules (RGM) despite low sequence identity [2].	Domain
B	PF12714	TILa domain (TILa)	TILa domain	This cysteine rich domain occurs along side the TIL Pfam:PF01826 domain and is likely to be a distantly related relative.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D [auth F]	Fc fragment of IgG binding protein	cation binding ion binding binding metal ion binding small molecule binding structural molecule activity extracellular matrix structural constituent	-	cellular anatomical structure extracellular region mucus layer extracellular matrix external encapsulating structure
B	Fc fragment of IgG binding protein	structural molecule activity extracellular matrix structural constituent	-	cellular anatomical structure extracellular region mucus layer extracellular matrix external encapsulating structure
A	Fc fragment of IgG binding protein	cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure extracellular region mucus layer

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, D [auth F]	IPR036084	Serine protease inhibitor-like superfamily	Homologous Superfamily
C, D [auth F]	IPR050780	Mucin/von Willebrand/Thrombospondin superfamily	Family
C, D [auth F]	IPR025615	TILa domain	Domain
C, D [auth F]	IPR003645	Follistatin-like, N-terminal	Domain
C, D [auth F]	IPR002919	Trypsin Inhibitor-like, cysteine rich domain	Domain
C, D [auth F]	IPR001007	VWFC domain	Domain
C, D [auth F]	IPR001846	von Willebrand factor, type D domain	Domain
C, D [auth F]	IPR014853	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Domain
C, D [auth F]	IPR036084	Serine protease inhibitor-like superfamily	Homologous Superfamily
C, D [auth F]	IPR050780	Mucin/von Willebrand/Thrombospondin superfamily	Family
C, D [auth F]	IPR025615	TILa domain	Domain
C, D [auth F]	IPR003645	Follistatin-like, N-terminal	Domain
C, D [auth F]	IPR002919	Trypsin Inhibitor-like, cysteine rich domain	Domain
C, D [auth F]	IPR001007	VWFC domain	Domain
C, D [auth F]	IPR001846	von Willebrand factor, type D domain	Domain
C, D [auth F]	IPR014853	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Domain
B	IPR036084	Serine protease inhibitor-like superfamily	Homologous Superfamily
B	IPR050780	Mucin/von Willebrand/Thrombospondin superfamily	Family
B	IPR025615	TILa domain	Domain
B	IPR003645	Follistatin-like, N-terminal	Domain
B	IPR002919	Trypsin Inhibitor-like, cysteine rich domain	Domain
B	IPR001007	VWFC domain	Domain
B	IPR001846	von Willebrand factor, type D domain	Domain
B	IPR014853	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Domain
A	IPR036084	Serine protease inhibitor-like superfamily	Homologous Superfamily
A	IPR050780	Mucin/von Willebrand/Thrombospondin superfamily	Family
A	IPR025615	TILa domain	Domain
A	IPR003645	Follistatin-like, N-terminal	Domain
A	IPR002919	Trypsin Inhibitor-like, cysteine rich domain	Domain
A	IPR001007	VWFC domain	Domain
A	IPR001846	von Willebrand factor, type D domain	Domain
A	IPR014853	VWF/SSPO/Zonadhesin-like, cysteine-rich domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8R0T | pdb_00008r0t

STRUCTURE OF THE MOUSE FCGBP DIMER PROTEIN IN ITS SEMIEXTENDED CONFORMATION

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage