Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 0]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8091481 3000334 SCOP2B (2021-05-27)
E [auth B]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063850 3001397 SCOP2B (2021-05-27)
K [auth J]SCOP2B SuperfamilyNucleic acid-binding proteins8095431 3000135 SCOP2B (2021-05-27)
L [auth K]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052599 3000068 SCOP2B (2021-05-27)
R [auth Q]SCOP2B SuperfamilyRibosomal protein S218053089 3002159 SCOP2B (2021-05-27)
S [auth R]SCOP2B SuperfamilyMitochondrial 28S ribosomal protein S22-like8051932 3002074 SCOP2B (2021-05-27)
YSCOP2B SuperfamilyMitochondrial 28S ribosomal protein S31-like8090914 3002471 SCOP2B (2021-05-27)
J [auth I]SCOP2B SuperfamilyTranslational machinery components8098948 3000571 SCOP2B (2021-05-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF16053Mitochondrial 28S ribosomal protein S34 (MRP-S34)Mitochondrial 28S ribosomal protein S34- Family
E [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
G [auth E]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
I [auth H]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
K [auth J]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
L [auth K]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
N [auth M]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
O [auth N]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
P [auth O]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
R [auth Q]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
S [auth R]PF10245Mitochondrial 28S ribosomal protein S22 (MRP-S22)Mitochondrial 28S ribosomal protein S22- Family
U [auth T]PF05047Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)Mitochondrial ribosomal protein L51 / S25 / CI-B8 domainThe proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.
Domain
V [auth U]PF14943Mitochondrial ribosome subunit S26 (MRP-S26)Mitochondrial ribosome subunit S26- Family
PF08293Mitochondrial ribosomal subunit S27 (MRP-S33)Mitochondrial ribosomal subunit S27- Family
AA [auth D]PF21251Small ribosomal subunit protein uS5m, N-terminal (Ribosomal_uS5m_N)Small ribosomal subunit protein uS5m, N-terminalThis entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the m ...This entry represents an extension found at the N-terminal of the mitochondrial 28S Small ribosomal subunit protein uS5m [1,2]. This region lines a part of the mRNA entry path and connects the 28S subunit body to the head forming a latch across the mRNA channel entrance [2].
Domain
AA [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
AA [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
BA [auth G]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
J [auth I]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
M [auth L]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
Q [auth P]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
B [auth 1]PF10213Mitochondrial ribosomal subunit protein (MRP-S28)Mitochondrial ribosomal subunit protein- Family
T [auth S]PF10484Mitochondrial ribosomal protein S23 (MRP-S23)Mitochondrial ribosomal protein S23- Family
PF10236Mitochondrial ribosomal death-associated protein 3 (DAP3)Mitochondrial ribosomal death-associated protein 3- Family
DA [auth 4]PF13812Pentatricopeptide repeat domain (PPR_3)Pentatricopeptide repeat domain- Repeat
DA [auth 4]PF22330Small ribosomal subunit protein mS39, PPR (Rib_mS39_PPR)Small ribosomal subunit protein mS39, PPR- Repeat
F [auth C]PF14955Mitochondrial ribosome subunit S24 (MRP-S24)Mitochondrial ribosome subunit S24- Family
H [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]28S ribosomal protein S34, mitochondrial
C [auth 3]Aurora kinase A-interacting protein-
D [auth A]12S mitochondrial rRNA---
E [auth B]28S ribosomal protein S2, mitochondrial
G [auth E]28S ribosomal protein S6, mitochondrial
I [auth H]28S ribosomal protein S10, mitochondrial-
K [auth J]28S ribosomal protein S12, mitochondrial
L [auth K]28S ribosomal protein S14, mitochondrial
N [auth M]28S ribosomal protein S16, mitochondrial
O [auth N]28S ribosomal protein S17, mitochondrial
P [auth O]28S ribosomal protein S18b, mitochondrial
R [auth Q]28S ribosomal protein S21, mitochondrial
S [auth R]28S ribosomal protein S22, mitochondrial
U [auth T]28S ribosomal protein S25, mitochondrial
V [auth U]28S ribosomal protein S26, mitochondrial
28S ribosomal protein S31, mitochondrial
28S ribosomal protein S33, mitochondrial
AA [auth D]28S ribosomal protein S5, mitochondrial
BA [auth G]28S ribosomal protein S9, mitochondrial
CA [auth V]28S ribosomal protein S27, mitochondrial
J [auth I]28S ribosomal protein S11, mitochondrial
M [auth L]28S ribosomal protein S15, mitochondrial
Q [auth P]28S ribosomal protein S18c, mitochondrial
B [auth 1]28S ribosomal protein S35, mitochondrial
T [auth S]28S ribosomal protein S23, mitochondrial
28S ribosomal protein S28, mitochondrial
28S ribosomal protein S29, mitochondrial
DA [auth 4]Pentatricopeptide repeat domain-containing protein 3, mitochondrial
F [auth C]28S ribosomal protein S24, mitochondrial
H [auth F]28S ribosomal protein S7, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR032053Small ribosomal subunit protein mS34Family
C [auth 3]IPR013177Ribosomal protein mS38, C-terminalDomain
E [auth B]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
E [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
E [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
E [auth B]IPR001865Small ribosomal subunit protein uS2Family
G [auth E]IPR000529Small ribosomal subunit protein bS6Family
G [auth E]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
G [auth E]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
I [auth H]IPR027486Small ribosomal subunit protein uS10 domainDomain
I [auth H]IPR040055Small ribosomal subunit protein uS10mFamily
I [auth H]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
K [auth J]IPR006032Small ribosomal subunit protein uS12Family
K [auth J]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth J]IPR005679Ribosomal protein uS12, bacterial-typeFamily
L [auth K]IPR001209Small ribosomal subunit protein uS14Family
N [auth M]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
N [auth M]IPR000307Small ribosomal subunit protein bS16Family
O [auth N]IPR039193Small ribosomal subunit protein uS17m, metazoaFamily
O [auth N]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth N]IPR000266Small ribosomal subunit protein uS17Family
P [auth O]IPR040054Small ribosomal subunit protein mS40Family
P [auth O]IPR001648Small ribosomal subunit protein bS18Family
P [auth O]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
R [auth Q]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
R [auth Q]IPR001911Small ribosomal subunit protein bS21Family
S [auth R]IPR019374Small ribosomal subunit protein mS22Family
U [auth T]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
U [auth T]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
U [auth T]IPR040049Ribosomal subunit protein mS25/mL61, mitochondrialFamily
V [auth U]IPR026140Small ribosomal subunit protein mS26Family
IPR026299Mitochondrial 28S ribosomal protein S31Family
IPR013219Small ribosomal subunit protein mS33Family
AA [auth D]IPR000851Small ribosomal subunit protein uS5Family
AA [auth D]IPR048584Small ribosomal subunit protein uS5m, N-terminal domainDomain
AA [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
AA [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
AA [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
AA [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
AA [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
BA [auth G]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
BA [auth G]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth G]IPR000754Small ribosomal subunit protein uS9Family
BA [auth G]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth V]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
CA [auth V]IPR002885Pentatricopeptide repeatRepeat
CA [auth V]IPR019266Small ribosomal subunit protein mS27Family
CA [auth V]IPR034913mS27/PTCD2Family
J [auth I]IPR001971Small ribosomal subunit protein uS11Family
J [auth I]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
J [auth I]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth L]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
M [auth L]IPR000589Small ribosomal subunit protein uS15Family
M [auth L]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
Q [auth P]IPR001648Small ribosomal subunit protein bS18Family
Q [auth P]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
Q [auth P]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
B [auth 1]IPR039848Small ribosomal subunit protein mS35, mitochondrialFamily
B [auth 1]IPR019349Small ribosomal subunit protein mS35, mitochondrial, conserved domainDomain
T [auth S]IPR023611Small ribosomal subunit protein mS23, conserved domainDomain
T [auth S]IPR019520Small ribosomal subunit protein mS23, metazoaFamily
IPR019375Small ribosomal subunit protein bS1mFamily
IPR008092Small ribosomal subunit protein mS29, metazoan-typeFamily
IPR019368Small ribosomal subunit protein mS29Family
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
DA [auth 4]IPR037387Pentatricopeptide repeat domain-containing protein 3Family
DA [auth 4]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
DA [auth 4]IPR002885Pentatricopeptide repeatRepeat
F [auth C]IPR026146Small ribosomal subunit protein uS3m, metazoanFamily
H [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
H [auth F]IPR000235Small ribosomal subunit protein uS7Family
H [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth 0]PharosP82930
C [auth 3]PharosQ9NWT8
E [auth B]PharosQ9Y399
G [auth E]PharosP82932
I [auth H]PharosP82664
K [auth J]PharosO15235
L [auth K]PharosO60783
N [auth M]PharosQ9Y3D3
O [auth N]PharosQ9Y2R5
P [auth O]PharosQ9Y676
R [auth Q]PharosP82921
S [auth R]PharosP82650
U [auth T]PharosP82663
PharosQ92665
PharosQ9Y291
AA [auth D]PharosP82675
BA [auth G]PharosP82933
CA [auth V]PharosQ92552
J [auth I]PharosP82912
M [auth L]PharosP82914
Q [auth P]PharosQ9Y3D5
B [auth 1]PharosP82673
T [auth S]PharosQ9Y3D9
PharosQ9Y2Q9
PharosP51398
DA [auth 4]PharosQ96EY7